RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 CCT6AP40227 531 aaKnown RBP16.72■□□□□ 0.27
NXF1-213ENST00000532297 SWT1Q5T5J6 900 aaKnown RBP16.72■□□□□ 0.27
NXF1-213ENST00000532297 CRACR2AQ9BSW2 395 aa16.72■□□□□ 0.27
NXF1-213ENST00000532297 GUCA1BQ9UMX6 200 aa16.72■□□□□ 0.27
NXF1-213ENST00000532297 ENC1O14682 589 aa16.72■□□□□ 0.27
NXF1-213ENST00000532297 NTSR2O95665 410 aa16.72■□□□□ 0.27
NXF1-213ENST00000532297 KAT2BQ92831 832 aa16.72■□□□□ 0.27
NXF1-213ENST00000532297 ABHD10Q9NUJ1 306 aa16.72■□□□□ 0.27
NXF1-213ENST00000532297 SRPRBQ9Y5M8 271 aaKnown RBP16.72■□□□□ 0.27
NXF1-213ENST00000532297 CCDC196A0A1B0GTZ2 297 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 ZMYND10O75800 440 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 ADAMTS2O95450 1211 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 CDKAL1Q5VV42 579 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 CYP26C1Q6V0L0 522 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 FAM76AQ8TAV0 307 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 SPATA20Q8TB22 786 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 CEP89Q96ST8 783 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 NUP88Q99567 741 aaPredicted RBP16.71■□□□□ 0.27
NXF1-213ENST00000532297 KAT14Q9H8E8 782 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 CCDC87Q9NVE4 849 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 HDAC6Q9UBN7 1215 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 ZC3H4Q9UPT8 1303 aaKnown RBP16.71■□□□□ 0.27
NXF1-213ENST00000532297 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
NXF1-213ENST00000532297 ERVV-1B6SEH8 477 aa16.71■□□□□ 0.26
NXF1-213ENST00000532297 EBAG9O00559 213 aa16.71■□□□□ 0.26
NXF1-213ENST00000532297 FECHP22830 423 aa16.71■□□□□ 0.26
NXF1-213ENST00000532297 ERFEQ4G0M1 354 aa16.71■□□□□ 0.26
NXF1-213ENST00000532297 MMS19Q96T76 1030 aa16.71■□□□□ 0.26
NXF1-213ENST00000532297 TRIM10Q9UDY6 481 aa16.71■□□□□ 0.26
NXF1-213ENST00000532297 SHOX2O60902 331 aaPredicted RBP16.7■□□□□ 0.26
NXF1-213ENST00000532297 CCDC152Q4G0S7 254 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 TRAPPC11Q7Z392 1133 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 TFCP2L1Q9NZI6 479 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 CEP131Q9UPN4 1083 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 CTNND2Q9UQB3 1225 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 FAM169AQ9Y6X4 670 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 PNPLA7Q6ZV29 1317 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 RNF225M0QZC1 329 aaPredicted RBP16.7■□□□□ 0.26
NXF1-213ENST00000532297 KCNQ2O43526 872 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 GNAT2P19087 354 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 CUL4BQ13620 913 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 IFIT1BQ5T764 474 aaKnown RBP16.7■□□□□ 0.26
NXF1-213ENST00000532297 GSPT2Q8IYD1 628 aaKnown RBP16.7■□□□□ 0.26
NXF1-213ENST00000532297 TMTC2Q8N394 836 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 RASGRP4Q8TDF6 673 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 PAGE5Q96GU1 130 aa16.7■□□□□ 0.26
NXF1-213ENST00000532297 RIOK1Q9BRS2 568 aaKnown RBP16.7■□□□□ 0.26
NXF1-213ENST00000532297 BCL9LQ86UU0 1499 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 GOLGA6CA6NDK9 693 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 TRIM75PA6NK02 468 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 SRGAP2O75044 1071 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 GOLGA6DP0CG33 693 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 CHRM1P11229 460 aaPredicted RBP16.69■□□□□ 0.26
NXF1-213ENST00000532297 IRAK1P51617 712 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 MNAT1P51948 309 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 FUT2Q10981 343 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 ZNF579Q8NAF0 562 aaKnown RBP16.69■□□□□ 0.26
NXF1-213ENST00000532297 CAPZA3Q96KX2 299 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 ZSCAN10Q96SZ4 725 aaPredicted RBP16.69■□□□□ 0.26
NXF1-213ENST00000532297 RABEP2Q9H5N1 569 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 GOLGA6AQ9NYA3 693 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 ITIH6Q6UXX5 1313 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 DUOX1Q9NRD9 1551 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 NPY5RQ15761 445 aa16.69■□□□□ 0.26
NXF1-213ENST00000532297 AATFQ9NY61 560 aaKnown RBP eCLIP16.69■□□□□ 0.26
NXF1-213ENST00000532297 USP17L12C9JPN9 530 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 USP17L21D6R901 530 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 N4BP3O15049 544 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 KRT2P35908 639 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 FBXW10Q5XX13 1052 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.68■□□□□ 0.26
NXF1-213ENST00000532297 PIK3AP1Q6ZUJ8 805 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 CELF1Q92879 486 aaKnown RBP16.68■□□□□ 0.26
NXF1-213ENST00000532297 EEF2KMTQ96G04 330 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
NXF1-213ENST00000532297 NID2Q14112 1375 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 AGPSO00116 658 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 MCM7P33993 719 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 ESR2Q92731 530 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 PLIN2Q99541 437 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 PHF20Q9BVI0 1012 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 SELENOOQ9BVL4 669 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 EHD4Q9H223 541 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 SAR1BQ9Y6B6 198 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 STRCQ7RTU9 1775 aa16.68■□□□□ 0.26
NXF1-213ENST00000532297 SEMA3EO15041 775 aa16.67■□□□□ 0.26
NXF1-213ENST00000532297 ATP1A1P05023 1023 aaKnown RBP16.67■□□□□ 0.26
NXF1-213ENST00000532297 HNRNPH1P31943 449 aaKnown RBP16.67■□□□□ 0.26
NXF1-213ENST00000532297 KRT9P35527 623 aa16.67■□□□□ 0.26
NXF1-213ENST00000532297 IL17AQ16552 155 aa16.67■□□□□ 0.26
NXF1-213ENST00000532297 CT47A1Q5JQC4 288 aaPredicted RBP16.67■□□□□ 0.26
NXF1-213ENST00000532297 SRBD1Q8N5C6 995 aaKnown RBP16.67■□□□□ 0.26
NXF1-213ENST00000532297 BCAS4Q8TDM0 211 aa16.67■□□□□ 0.26
NXF1-213ENST00000532297 GPKOWQ92917 476 aaPredicted RBP eCLIP16.67■□□□□ 0.262e-6■■■■■ 27.5
NXF1-213ENST00000532297 CHP1Q99653 195 aa16.67■□□□□ 0.26
NXF1-213ENST00000532297 VPS16Q9H269 839 aa16.67■□□□□ 0.26
NXF1-213ENST00000532297 XDHP47989 1333 aa16.67■□□□□ 0.26
NXF1-213ENST00000532297 LOC102724428A0A0B4J2F2 783 aa16.67■□□□□ 0.26
NXF1-213ENST00000532297 MYBL2P10244 700 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms