RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 FMNL1O95466 1100 aaPredicted RBP11.04□□□□□ -0.64
SRPRA-207ENST00000532268 CTDNEP1O95476 244 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 VEGFBP49765 207 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 STAT2P52630 851 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 TRIM29Q14134 588 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 LARP1BQ659C4 914 aaKnown RBP11.04□□□□□ -0.64
SRPRA-207ENST00000532268 RGMBQ6NW40 437 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 FASTKD5Q7L8L6 764 aaKnown RBP11.04□□□□□ -0.64
SRPRA-207ENST00000532268 FAM160B2Q86V87 743 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 WASF1Q92558 559 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 CWC22Q9HCG8 908 aaKnown RBP11.04□□□□□ -0.64
SRPRA-207ENST00000532268 FEM1BQ9UK73 627 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 A0A0G2JLL6 359 aaPredicted RBP11.03□□□□□ -0.64
SRPRA-207ENST00000532268 VPS37CA5D8V6 355 aaPredicted RBP11.03□□□□□ -0.64
SRPRA-207ENST00000532268 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
SRPRA-207ENST00000532268 CETPP11597 493 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 GJA5P36382 358 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 GTF2A2P52657 109 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 SNAP25P60880 206 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 PABPC4Q13310 644 aaKnown RBP eCLIP11.03□□□□□ -0.64
SRPRA-207ENST00000532268 NTRK3Q16288 839 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 SPRYD7Q5W111 196 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 CCDC174Q6PII3 467 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 HEATR3Q7Z4Q2 680 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 PRRT2Q7Z6L0 340 aaPredicted RBP11.03□□□□□ -0.64
SRPRA-207ENST00000532268 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 ADGRF4Q8IZF3 695 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 SMARCC2Q8TAQ2 1214 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 C8orf76Q96K31 380 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 C12orf42Q96LP6 360 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 PIGSQ96S52 555 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 SLF1Q9BQI6 1058 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 ALG1Q9BT22 464 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 RNF26Q9BY78 433 aaPredicted RBP11.03□□□□□ -0.64
SRPRA-207ENST00000532268 FBXO28Q9NVF7 368 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
SRPRA-207ENST00000532268 KCNH4Q9UQ05 1017 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 CNTNAP5Q8WYK1 1306 aa11.03□□□□□ -0.64
SRPRA-207ENST00000532268 CCL15-CCL14A0A0B4J2E2 113 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 USP17L15C9J2P7 530 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 USP17L13C9JLJ4 530 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 USP17L11C9JVI0 530 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 USP17L18D6R9N7 530 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 USP17L22D6RA61 530 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 USP17L17D6RBQ6 530 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 USP17L19D6RCP7 530 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 USP17L20D6RJB6 530 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 SCG2P13521 617 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 XBP1P17861 261 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 PDCP20941 246 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 IRX3P78415 501 aaPredicted RBP11.02□□□□□ -0.65
SRPRA-207ENST00000532268 GUCY1B3Q02153 619 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 USP17L24Q0WX57 530 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 CDC37Q16543 378 aaPredicted RBP11.02□□□□□ -0.65
SRPRA-207ENST00000532268 CCL15Q16663 113 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 SH3D19Q5HYK7 790 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 TREML2Q5T2D2 321 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 FOXD4L5Q5VV16 416 aaPredicted RBP11.02□□□□□ -0.65
SRPRA-207ENST00000532268 RASAL3Q86YV0 1011 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 PROCA1Q8NCQ7 364 aaPredicted RBP11.02□□□□□ -0.65
SRPRA-207ENST00000532268 FOXD4L4Q8WXT5 416 aaPredicted RBP11.02□□□□□ -0.65
SRPRA-207ENST00000532268 JMJD4Q9H9V9 463 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 PRR12Q9ULL5 1215 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 STK36Q9NRP7 1315 aa11.02□□□□□ -0.65
SRPRA-207ENST00000532268 CYTH3O43739 400 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 ZBED4O75132 1171 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 ZBTB48P10074 688 aaPredicted RBP11.01□□□□□ -0.65
SRPRA-207ENST00000532268 OSBPP22059 807 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 SMARCA1P28370 1054 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 FUT2Q10981 343 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 GNL2Q13823 731 aaKnown RBP11.01□□□□□ -0.65
SRPRA-207ENST00000532268 MCTP1Q6DN14 999 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 BTNL9Q6UXG8 535 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 PRPF38AQ8NAV1 312 aaKnown RBP11.01□□□□□ -0.65
SRPRA-207ENST00000532268 GPKOWQ92917 476 aaPredicted RBP eCLIP11.01□□□□□ -0.65
SRPRA-207ENST00000532268 CCDC102AQ96A19 550 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 CAPNS2Q96L46 248 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 AIFM3Q96NN9 605 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 RIOX1Q9H6W3 641 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 AGTPBP1Q9UPW5 1226 aa11.01□□□□□ -0.65
SRPRA-207ENST00000532268 WDR33Q9C0J8 1336 aaKnown RBP11.01□□□□□ -0.65
SRPRA-207ENST00000532268 PNMA6FA0A0J9YX94 578 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 ZBTB5O15062 677 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 FDPSP14324 419 aaKnown RBP11□□□□□ -0.65
SRPRA-207ENST00000532268 MAP2K2P36507 400 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 NAPAP54920 295 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 PLS1Q14651 629 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 COG2Q14746 738 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 SAFBQ15424 915 aaKnown RBP eCLIP11□□□□□ -0.65
SRPRA-207ENST00000532268 PFKFB3Q16875 520 aaPredicted RBP11□□□□□ -0.65
SRPRA-207ENST00000532268 SLC35G1Q2M3R5 365 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 QRICH1Q2TAL8 776 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 USH1GQ495M9 461 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 CATSPERGQ6ZRH7 1159 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 CPXCR1Q8N123 301 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 ATG4CQ96DT6 458 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 VPS54Q9P1Q0 977 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
SRPRA-207ENST00000532268 PHIPQ8WWQ0 1821 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms