RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 FGD1P98174 961 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 TOB2Q14106 344 aaPredicted RBP14.63□□□□□ -0.07
COPB1-208ENST00000532088 PPP2R5BQ15173 497 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 SPRYD7Q5W111 196 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 USP17L2Q6R6M4 530 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 RASAL3Q86YV0 1011 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 PROCA1Q8NCQ7 364 aaPredicted RBP14.63□□□□□ -0.07
COPB1-208ENST00000532088 VCPKMTQ9H867 229 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 MYH4Q9Y623 1939 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 A0A0G2JLL6 359 aaPredicted RBP14.62□□□□□ -0.07
COPB1-208ENST00000532088 CCDC69A6NI79 296 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 IRF6O14896 467 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 SNHG28P0DPA3 235 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 ZNF157P51786 506 aaPredicted RBP14.62□□□□□ -0.07
COPB1-208ENST00000532088 SPP2Q13103 211 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 SNAPC2Q13487 334 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 SYNE3Q6ZMZ3 975 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 PRRT2Q7Z6L0 340 aaPredicted RBP14.62□□□□□ -0.07
COPB1-208ENST00000532088 CATIPQ7Z7H3 387 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 KRI1Q8N9T8 703 aaKnown RBP14.62□□□□□ -0.07
COPB1-208ENST00000532088 PNMA1Q8ND90 353 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 ACER1Q8TDN7 264 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 DCAF4Q8WV16 495 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 BRF1Q92994 677 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 ZNF274Q96GC6 653 aaPredicted RBP14.62□□□□□ -0.07
COPB1-208ENST00000532088 GMCL1Q96IK5 515 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 TCEANC2Q96MN5 208 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 FEZ1Q99689 392 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 LRRC2Q9BYS8 371 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.62□□□□□ -0.07
COPB1-208ENST00000532088 TSKSQ9UJT2 592 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 SLC12A7Q9Y666 1083 aa14.62□□□□□ -0.07
COPB1-208ENST00000532088 F5H6K3 240 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 GJA5P36382 358 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 ECE1P42892 770 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 GTF2A2P52657 109 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 AK2P54819 239 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 KLRC3Q07444 240 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 TROAPQ12815 778 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 MTMR2Q13614 643 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 PROX2Q3B8N5 592 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 APOA5Q6Q788 366 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 NFXL1Q6ZNB6 911 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 FASTKD5Q7L8L6 764 aaKnown RBP14.61□□□□□ -0.07
COPB1-208ENST00000532088 CLEC10AQ8IUN9 316 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 LRRC47Q8N1G4 583 aaKnown RBP14.61□□□□□ -0.07
COPB1-208ENST00000532088 CHMP4CQ96CF2 233 aa14.61□□□□□ -0.07
COPB1-208ENST00000532088 LOC285556D6RIA3 1793 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 MANSC4A6NHS7 340 aaPredicted RBP14.6□□□□□ -0.07
COPB1-208ENST00000532088 TRIM75PA6NK02 468 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 FAM155AB1AL88 458 aaPredicted RBP14.6□□□□□ -0.07
COPB1-208ENST00000532088 WDR46O15213 610 aaKnown RBP14.6□□□□□ -0.07
COPB1-208ENST00000532088 NDUFB10O96000 172 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 PDHBP11177 359 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 CETPP11597 493 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 INHBEP58166 350 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 LSM11P83369 360 aaKnown RBP eCLIP14.6□□□□□ -0.07
COPB1-208ENST00000532088 ATP2B2Q01814 1243 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 DEFB115Q30KQ5 88 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 GPATCH4Q5T3I0 446 aaKnown RBP14.6□□□□□ -0.07
COPB1-208ENST00000532088 SLFN13Q68D06 897 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 CCDC84Q86UT8 332 aaPredicted RBP14.6□□□□□ -0.07
COPB1-208ENST00000532088 ZNF654Q8IZM8 581 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 SNX21Q969T3 373 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 ZSCAN31Q96LW9 406 aaPredicted RBP14.6□□□□□ -0.07
COPB1-208ENST00000532088 SLC24A3Q9HC58 644 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 TMOD4Q9NZQ9 345 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 PCDH10Q9P2E7 1040 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 LIMCH1Q9UPQ0 1083 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 SLC45A1Q9Y2W3 748 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 PTPRFP10586 1907 aa14.6□□□□□ -0.07
COPB1-208ENST00000532088 KLF18A0A0U1RQI7 1052 aa14.59□□□□□ -0.07
COPB1-208ENST00000532088 TK2O00142 265 aa14.59□□□□□ -0.07
COPB1-208ENST00000532088 ZBTB43O43298 467 aa14.59□□□□□ -0.07
COPB1-208ENST00000532088 PLA2G6O60733 806 aa14.59□□□□□ -0.07
COPB1-208ENST00000532088 C1QTNF8P60827 252 aa14.59□□□□□ -0.07
COPB1-208ENST00000532088 GRM4Q14833 912 aa14.59□□□□□ -0.07
COPB1-208ENST00000532088 ASPRV1Q53RT3 343 aa14.59□□□□□ -0.07
COPB1-208ENST00000532088 SENP2Q9HC62 589 aa14.59□□□□□ -0.07
COPB1-208ENST00000532088 ZCCHC17Q9NP64 241 aaKnown RBP14.59□□□□□ -0.07
COPB1-208ENST00000532088 SH2B1Q9NRF2 756 aaPredicted RBP14.59□□□□□ -0.07
COPB1-208ENST00000532088 RBM28Q9NW13 759 aaKnown RBP14.59□□□□□ -0.07
COPB1-208ENST00000532088 BRPF3Q9ULD4 1205 aa14.59□□□□□ -0.07
COPB1-208ENST00000532088 CCDC196A0A1B0GTZ2 297 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 BMP3P12645 472 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 HSPA6P17066 643 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 SMARCA1P28370 1054 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 PDIA3P30101 505 aaKnown RBP14.58□□□□□ -0.08
COPB1-208ENST00000532088 HOXA7P31268 230 aaPredicted RBP14.58□□□□□ -0.08
COPB1-208ENST00000532088 KIF5BP33176 963 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 SLC1A4P43007 532 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 GNAQP50148 359 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 HMGCS2P54868 508 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 APOBRQ0VD83 1088 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 NOGQ13253 232 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 PABPC4Q13310 644 aaKnown RBP eCLIP14.58□□□□□ -0.081e-9■■□□□ 12.2
COPB1-208ENST00000532088 CTCFLQ8NI51 663 aaPredicted RBP14.58□□□□□ -0.08
COPB1-208ENST00000532088 KRTAP3-3Q9BYR6 98 aa14.58□□□□□ -0.08
COPB1-208ENST00000532088 KRTAP3-2Q9BYR7 98 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms