RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 PAGR1Q9BTK6 254 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 UBA5Q9GZZ9 404 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 HOXC10Q9NYD6 342 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 CPA4Q9UI42 421 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 MAD2L2Q9UI95 211 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 COL11A1P12107 1806 aaPredicted RBP13.31□□□□□ -0.28
CHD7-209ENST00000529472 ADGRA2Q96PE1 1338 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 GOLGA8AA7E2F4 631 aa13.3□□□□□ -0.28
CHD7-209ENST00000529472 HSPA1AP0DMV8 641 aaKnown RBP13.3□□□□□ -0.28
CHD7-209ENST00000529472 HSPA1BP0DMV9 641 aaKnown RBP13.3□□□□□ -0.28
CHD7-209ENST00000529472 DSG3P32926 999 aa13.3□□□□□ -0.28
CHD7-209ENST00000529472 KIF5BP33176 963 aa13.3□□□□□ -0.28
CHD7-209ENST00000529472 SNAP25P60880 206 aa13.3□□□□□ -0.28
CHD7-209ENST00000529472 RABEP1Q15276 862 aa13.3□□□□□ -0.28
CHD7-209ENST00000529472 SYDE2Q5VT97 1194 aa13.3□□□□□ -0.28
CHD7-209ENST00000529472 FAM160B2Q86V87 743 aa13.3□□□□□ -0.28
CHD7-209ENST00000529472 PRPF38AQ8NAV1 312 aaKnown RBP13.3□□□□□ -0.28
CHD7-209ENST00000529472 PRR12Q9ULL5 1215 aa13.3□□□□□ -0.28
CHD7-209ENST00000529472 MYPNQ86TC9 1320 aa13.3□□□□□ -0.28
CHD7-209ENST00000529472 PALM3A6NDB9 673 aaPredicted RBP13.29□□□□□ -0.28
CHD7-209ENST00000529472 KLRF2D3W0D1 207 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 VWA5AO00534 786 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 DHX16O60231 1041 aaKnown RBP13.29□□□□□ -0.28
CHD7-209ENST00000529472 PLA2G6O60733 806 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
CHD7-209ENST00000529472 GCLCP48506 637 aaPredicted RBP13.29□□□□□ -0.28
CHD7-209ENST00000529472 METAP2P50579 478 aaKnown RBP eCLIP13.29□□□□□ -0.28
CHD7-209ENST00000529472 STK3Q13188 491 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 PLS1Q14651 629 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 ANKRD1Q15327 319 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 RTN1Q16799 776 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 POTEEQ6S8J3 1075 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 BTNL9Q6UXG8 535 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 FANCBQ8NB91 859 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 GTF3C2Q8WUA4 911 aaPredicted RBP13.29□□□□□ -0.28
CHD7-209ENST00000529472 MAP3K14Q99558 947 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 CFHR5Q9BXR6 569 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 ALDH8A1Q9H2A2 487 aaPredicted RBP13.29□□□□□ -0.28
CHD7-209ENST00000529472 TXNRD2Q9NNW7 524 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 BTBD7Q9P203 1132 aa13.29□□□□□ -0.28
CHD7-209ENST00000529472 CTDP1Q9Y5B0 961 aaPredicted RBP13.29□□□□□ -0.28
CHD7-209ENST00000529472 FOXN1O15353 648 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 ZBED4O75132 1171 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 PLEKHA8P1O95397 391 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 BCRP11274 1271 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 PDIA3P30101 505 aaKnown RBP13.28□□□□□ -0.28
CHD7-209ENST00000529472 ERVK-9P63128 1117 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 ERVK-24P63145 666 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 CCDC174Q6PII3 467 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 C17orf99Q6UX52 265 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 LBX2Q6XYB7 198 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 CMTR1Q8N1G2 835 aaKnown RBP13.28□□□□□ -0.28
CHD7-209ENST00000529472 MB21D1Q8N884 522 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 SLC38A10Q9HBR0 1119 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 NCOA5Q9HCD5 579 aaKnown RBP13.28□□□□□ -0.28
CHD7-209ENST00000529472 VAT1LQ9HCJ6 419 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 RBPJLQ9UBG7 517 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 TPCN1Q9ULQ1 816 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
CHD7-209ENST00000529472 BAZ2BQ9UIF8 2168 aaKnown RBP13.27□□□□□ -0.28
CHD7-209ENST00000529472 GPR25O00155 361 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 ST18O60284 1047 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 CNMDO75829 334 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 SLC4A3P48751 1232 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 RCAN1P53805 252 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 EVCP57679 992 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 CCT2P78371 535 aaKnown RBP13.27□□□□□ -0.29
CHD7-209ENST00000529472 TMEM132BQ14DG7 1078 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 FAM110CQ1W6H9 321 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 TMTC3Q6ZXV5 915 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 NBPF11Q86T75 865 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 ADGRF4Q8IZF3 695 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 CPXCR1Q8N123 301 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 CCDC82Q8N4S0 544 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 GPRC5AQ8NFJ5 357 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 PIBF1Q8WXW3 757 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 RBM28Q9NW13 759 aaKnown RBP13.27□□□□□ -0.29
CHD7-209ENST00000529472 ADAMTS5Q9UNA0 930 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 RABGAP1Q9Y3P9 1069 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 MYH6P13533 1939 aa13.27□□□□□ -0.29
CHD7-209ENST00000529472 ZSWIM8A7E2V4 1837 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 HSPA8P11142 646 aaKnown RBP13.26□□□□□ -0.29
CHD7-209ENST00000529472 CDC27P30260 824 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 ADD1P35611 737 aaKnown RBP13.26□□□□□ -0.29
CHD7-209ENST00000529472 GNAQP50148 359 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 SP3Q02447 781 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 NID2Q14112 1375 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 CDC37Q16543 378 aaPredicted RBP13.26□□□□□ -0.29
CHD7-209ENST00000529472 SLC35G1Q2M3R5 365 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 SNRNP48Q6IEG0 339 aaKnown RBP13.26□□□□□ -0.29
CHD7-209ENST00000529472 HOMER1Q86YM7 354 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 SRBD1Q8N5C6 995 aaKnown RBP13.26□□□□□ -0.29
CHD7-209ENST00000529472 REPS2Q8NFH8 660 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 ZNF274Q96GC6 653 aaPredicted RBP13.26□□□□□ -0.29
CHD7-209ENST00000529472 SPATC1LQ9H0A9 340 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 RANBP17Q9H2T7 1088 aaKnown RBP13.26□□□□□ -0.29
CHD7-209ENST00000529472 JMJD4Q9H9V9 463 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 RAVER2Q9HCJ3 691 aaKnown RBP13.26□□□□□ -0.29
CHD7-209ENST00000529472 MORF4L1Q9UBU8 362 aa13.26□□□□□ -0.29
CHD7-209ENST00000529472 ZNF214Q9UL59 606 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms