RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 SYTL5Q8TDW5 730 aaPredicted RBP7.27□□□□□ -1.25
CTR9-204ENST00000529355 MISP3Q96FF7 219 aa7.27□□□□□ -1.25
CTR9-204ENST00000529355 FOXP3Q9BZS1 431 aa7.27□□□□□ -1.25
CTR9-204ENST00000529355 ANGEL1Q9UNK9 670 aaKnown RBP7.27□□□□□ -1.25
CTR9-204ENST00000529355 OAS3Q9Y6K5 1087 aaKnown RBP7.27□□□□□ -1.25
CTR9-204ENST00000529355 FAM221BA6H8Z2 402 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 TBX1O43435 398 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 VAMP4O75379 141 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 EGR3Q06889 387 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 SERINC3Q13530 473 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 RALGPS1Q5JS13 557 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 NOL9Q5SY16 702 aaKnown RBP7.26□□□□□ -1.25
CTR9-204ENST00000529355 FIBCD1Q8N539 461 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 SMARCC1Q92922 1105 aaPredicted RBP7.26□□□□□ -1.25
CTR9-204ENST00000529355 MCMBPQ9BTE3 642 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 TRIM55Q9BYV6 548 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 ASCC2Q9H1I8 757 aaPredicted RBP7.26□□□□□ -1.25
CTR9-204ENST00000529355 TRIT1Q9H3H1 467 aaKnown RBP7.26□□□□□ -1.25
CTR9-204ENST00000529355 USP35Q9P2H5 1018 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 EBF1Q9UH73 591 aa7.26□□□□□ -1.25
CTR9-204ENST00000529355 DNAJC25-GNG10A0A024R161 153 aa7.25□□□□□ -1.25
CTR9-204ENST00000529355 SUSD5O60279 629 aa7.25□□□□□ -1.25
CTR9-204ENST00000529355 IGSF3O75054 1194 aa7.25□□□□□ -1.25
CTR9-204ENST00000529355 FKTNO75072 461 aa7.25□□□□□ -1.25
CTR9-204ENST00000529355 GP2P55259 537 aaKnown RBP7.25□□□□□ -1.25
CTR9-204ENST00000529355 STK11IPQ8N1F8 1099 aa7.25□□□□□ -1.25
CTR9-204ENST00000529355 DAGLBQ8NCG7 672 aa7.25□□□□□ -1.25
CTR9-204ENST00000529355 ZDHHC15Q96MV8 337 aa7.25□□□□□ -1.25
CTR9-204ENST00000529355 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
CTR9-204ENST00000529355 ADAMTS10Q9H324 1103 aa7.25□□□□□ -1.25
CTR9-204ENST00000529355 MBNL3Q9NUK0 354 aaKnown RBP7.25□□□□□ -1.25
CTR9-204ENST00000529355 RNASE1P07998 156 aaKnown RBP7.24□□□□□ -1.25
CTR9-204ENST00000529355 SYPP08247 313 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 FUT4P22083 530 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 LTKP29376 864 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 TEKQ02763 1124 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 NCAPHQ15003 741 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 PLCL1Q15111 1095 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 TCEAL1Q15170 157 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 ARMC5Q96C12 935 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 DSCC1Q9BVC3 393 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 HIRIP3Q9BW71 556 aaPredicted RBP7.24□□□□□ -1.25
CTR9-204ENST00000529355 KRTAP4-5Q9BYR2 181 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 LNPKQ9C0E8 428 aa7.24□□□□□ -1.25
CTR9-204ENST00000529355 TMEM82A0PJX8 343 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 ANKRD34BA5PLL1 514 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 ITGA4P13612 1032 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 DPY19L1Q2PZI1 675 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 ANGEL2Q5VTE6 544 aaKnown RBP7.23□□□□□ -1.25
CTR9-204ENST00000529355 SPATC1Q76KD6 591 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 TMPRSS7Q7RTY8 843 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 ZNF655Q8N720 491 aaPredicted RBP7.23□□□□□ -1.25
CTR9-204ENST00000529355 ENOX1Q8TC92 643 aaKnown RBP7.23□□□□□ -1.25
CTR9-204ENST00000529355 PPP1R14AQ96A00 147 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 APBA2Q99767 749 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 C19orf73Q9NVV2 129 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 SLAMF8Q9P0V8 285 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 WHRNQ9P202 907 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 CGGBP1Q9UFW8 167 aaPredicted RBP7.23□□□□□ -1.25
CTR9-204ENST00000529355 TCFL5Q9UL49 500 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 SUGT1Q9Y2Z0 365 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 MSRB2Q9Y3D2 182 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 FHOD1Q9Y613 1164 aa7.23□□□□□ -1.25
CTR9-204ENST00000529355 IFNGR1P15260 489 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 VAV1P15498 845 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 ERVFC1P60507 584 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 SLC10A6Q3KNW5 377 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 ZNF792Q3KQV3 632 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 SV2CQ496J9 727 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 RTP2Q5QGT7 225 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 ARHGEF39Q8N4T4 335 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 LRRN4CLQ8ND94 238 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 SLC12A9Q9BXP2 914 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 PIF1Q9H611 641 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 AKT3Q9Y243 479 aa7.22□□□□□ -1.25
CTR9-204ENST00000529355 ITGAVP06756 1048 aa7.21□□□□□ -1.26
CTR9-204ENST00000529355 RPL10P27635 214 aaKnown RBP7.21□□□□□ -1.26
CTR9-204ENST00000529355 GRIA2P42262 883 aa7.21□□□□□ -1.26
CTR9-204ENST00000529355 CEBPAP49715 358 aaPredicted RBP7.21□□□□□ -1.26
CTR9-204ENST00000529355 CYP4F3Q08477 520 aa7.21□□□□□ -1.26
CTR9-204ENST00000529355 RASA3Q14644 834 aa7.21□□□□□ -1.26
CTR9-204ENST00000529355 SF1Q15637 639 aaKnown RBP7.21□□□□□ -1.26
CTR9-204ENST00000529355 LINC00116Q8NCU8 138 aa7.21□□□□□ -1.26
CTR9-204ENST00000529355 PI4K2BQ8TCG2 481 aa7.21□□□□□ -1.26
CTR9-204ENST00000529355 UBXN4Q92575 508 aa7.21□□□□□ -1.26
CTR9-204ENST00000529355 FCRL3Q96P31 734 aaPredicted RBP7.21□□□□□ -1.26
CTR9-204ENST00000529355 AP5S1Q9NUS5 200 aa7.21□□□□□ -1.26
CTR9-204ENST00000529355 PFDN2Q9UHV9 154 aa7.21□□□□□ -1.26
CTR9-204ENST00000529355 ZNF281Q9Y2X9 895 aa7.21□□□□□ -1.26
CTR9-204ENST00000529355 DIAPH1O60610 1272 aaKnown RBP7.2□□□□□ -1.26
CTR9-204ENST00000529355 PPM1BO75688 479 aa7.2□□□□□ -1.26
CTR9-204ENST00000529355 KCNH1O95259 989 aa7.2□□□□□ -1.26
CTR9-204ENST00000529355 EFEMP2O95967 443 aa7.2□□□□□ -1.26
CTR9-204ENST00000529355 TAL1P17542 331 aaPredicted RBP7.2□□□□□ -1.26
CTR9-204ENST00000529355 HK2P52789 917 aa7.2□□□□□ -1.26
CTR9-204ENST00000529355 CCDC144BQ3MJ40 725 aa7.2□□□□□ -1.26
CTR9-204ENST00000529355 DPH6Q7L8W6 267 aa7.2□□□□□ -1.26
CTR9-204ENST00000529355 TMEM52Q8NDY8 209 aa7.2□□□□□ -1.26
CTR9-204ENST00000529355 BVESQ8NE79 360 aa7.2□□□□□ -1.26
CTR9-204ENST00000529355 MRGPRX3Q96LB0 322 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms