RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 DUSP13Q9UII6 198 aa7.3□□□□□ -1.24
CD44-230ENST00000528922 MSRB2Q9Y3D2 182 aa7.3□□□□□ -1.24
CD44-230ENST00000528922 PCDHA11Q9Y5I1 949 aa7.3□□□□□ -1.24
CD44-230ENST00000528922 FHOD1Q9Y613 1164 aa7.3□□□□□ -1.24
CD44-230ENST00000528922 A0A087WZG4 1122 aa7.29□□□□□ -1.24
CD44-230ENST00000528922 SUSD5O60279 629 aa7.29□□□□□ -1.24
CD44-230ENST00000528922 ITGA4P13612 1032 aa7.29□□□□□ -1.24
CD44-230ENST00000528922 SOGA3Q5TF21 947 aa7.29□□□□□ -1.24
CD44-230ENST00000528922 ANGEL2Q5VTE6 544 aaKnown RBP7.29□□□□□ -1.24
CD44-230ENST00000528922 ADAT2Q7Z6V5 191 aaKnown RBP7.29□□□□□ -1.24
CD44-230ENST00000528922 APBA2Q99767 749 aa7.29□□□□□ -1.24
CD44-230ENST00000528922 CARS2Q9HA77 564 aaKnown RBP7.29□□□□□ -1.24
CD44-230ENST00000528922 LMCD1Q9NZU5 365 aa7.29□□□□□ -1.24
CD44-230ENST00000528922 SIRPGQ9P1W8 387 aa7.29□□□□□ -1.24
CD44-230ENST00000528922 THOC2Q8NI27 1593 aaKnown RBP7.29□□□□□ -1.24
CD44-230ENST00000528922 U2SURPO15042 1029 aaKnown RBP7.28□□□□□ -1.24
CD44-230ENST00000528922 PPM1BO75688 479 aa7.28□□□□□ -1.24
CD44-230ENST00000528922 FUT4P22083 530 aa7.28□□□□□ -1.24
CD44-230ENST00000528922 ZNF143P52747 638 aaPredicted RBP7.28□□□□□ -1.24
CD44-230ENST00000528922 ZP2Q05996 745 aa7.28□□□□□ -1.24
CD44-230ENST00000528922 FIBCD1Q8N539 461 aa7.28□□□□□ -1.24
CD44-230ENST00000528922 DSCC1Q9BVC3 393 aa7.28□□□□□ -1.24
CD44-230ENST00000528922 LGR4Q9BXB1 951 aa7.28□□□□□ -1.24
CD44-230ENST00000528922 PCGF6Q9BYE7 350 aa7.28□□□□□ -1.24
CD44-230ENST00000528922 GBP3Q9H0R5 595 aa7.28□□□□□ -1.24
CD44-230ENST00000528922 NOL6Q9H6R4 1146 aaKnown RBP7.28□□□□□ -1.24
CD44-230ENST00000528922 PRDM7Q9NQW5 492 aa7.28□□□□□ -1.24
CD44-230ENST00000528922 H0Y8X5 98 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 LTKP29376 864 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 EGR3Q06889 387 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 PPP2R5DQ14738 602 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 CRTC3Q6UUV7 619 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 TP53INP2Q8IXH6 220 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 Q8N3U1 123 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 ARHGEF39Q8N4T4 335 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 FOXP3Q9BZS1 431 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 LNPKQ9C0E8 428 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 ADAMTS6Q9UKP5 1117 aa7.27□□□□□ -1.24
CD44-230ENST00000528922 DIS3Q9Y2L1 958 aaKnown RBP7.27□□□□□ -1.24
CD44-230ENST00000528922 FAM221BA6H8Z2 402 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 CCDC85CA6NKD9 419 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 SYPP08247 313 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 TEKQ02763 1124 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 SLC10A6Q3KNW5 377 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 EEPD1Q7L9B9 569 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 LINC00116Q8NCU8 138 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 RCC1LQ96I51 464 aaKnown RBP7.27□□□□□ -1.25
CD44-230ENST00000528922 ZDHHC15Q96MV8 337 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 CCDC113Q9H0I3 377 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 CGGBP1Q9UFW8 167 aaPredicted RBP7.27□□□□□ -1.25
CD44-230ENST00000528922 TCFL5Q9UL49 500 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 SUGT1Q9Y2Z0 365 aa7.27□□□□□ -1.25
CD44-230ENST00000528922 RSF1Q96T23 1441 aaPredicted RBP7.26□□□□□ -1.25
CD44-230ENST00000528922 GSNP06396 782 aa7.26□□□□□ -1.25
CD44-230ENST00000528922 NAT2P11245 290 aa7.26□□□□□ -1.25
CD44-230ENST00000528922 BMP8BP34820 402 aa7.26□□□□□ -1.25
CD44-230ENST00000528922 GP2P55259 537 aaKnown RBP7.26□□□□□ -1.25
CD44-230ENST00000528922 SV2CQ496J9 727 aa7.26□□□□□ -1.25
CD44-230ENST00000528922 OSBPL2Q9H1P3 480 aa7.26□□□□□ -1.25
CD44-230ENST00000528922 MBNL3Q9NUK0 354 aaKnown RBP7.26□□□□□ -1.25
CD44-230ENST00000528922 AKT3Q9Y243 479 aa7.26□□□□□ -1.25
CD44-230ENST00000528922 ZNF281Q9Y2X9 895 aa7.26□□□□□ -1.25
CD44-230ENST00000528922 DNAJC25-GNG10A0A024R161 153 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 PDPK1O15530 556 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 IGSF3O75054 1194 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 VAMP4O75379 141 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 VAV1P15498 845 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 PCBP3P57721 371 aaKnown RBP7.25□□□□□ -1.25
CD44-230ENST00000528922 RASA3Q14644 834 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 PLCL1Q15111 1095 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 SLC23A3Q6PIS1 610 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 ZPBP2Q6X784 338 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 RNF111Q6ZNA4 994 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 ABI1Q8IZP0 508 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 LRRN4CLQ8ND94 238 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 AGBL5Q8NDL9 886 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 BVESQ8NE79 360 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 PI4K2BQ8TCG2 481 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 MKL1Q969V6 931 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 PPP1R14AQ96A00 147 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 MCMBPQ9BTE3 642 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 SNTG2Q9NY99 539 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 SF3B6Q9Y3B4 125 aaKnown RBP7.25□□□□□ -1.25
CD44-230ENST00000528922 EMC9Q9Y3B6 208 aa7.25□□□□□ -1.25
CD44-230ENST00000528922 OAS3Q9Y6K5 1087 aaKnown RBP7.25□□□□□ -1.25
CD44-230ENST00000528922 SCRIBQ14160 1630 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 TMEM82A0PJX8 343 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 FKTNO75072 461 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 ZNF205O95201 554 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 ITGAVP06756 1048 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 RASGRF1Q13972 1273 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 CCDC144BQ3MJ40 725 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 RALGPS1Q5JS13 557 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 RTP2Q5QGT7 225 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 DPH6Q7L8W6 267 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 ST13P5Q8NFI4 369 aaPredicted RBP7.24□□□□□ -1.25
CD44-230ENST00000528922 MRGPRX3Q96LB0 322 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 DEPDC7Q96QD5 511 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 SLC12A9Q9BXP2 914 aa7.24□□□□□ -1.25
CD44-230ENST00000528922 EPN3Q9H201 632 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms