RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 GINM1Q9NU53 330 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 PI4KBQ9UBF8 816 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 AFG3L2Q9Y4W6 797 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 AK9Q5TCS8 1911 aa8.58□□□□□ -1.04
ITGB1-218ENST00000528877 PDHXO00330 501 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 IDH1O75874 414 aaKnown RBP8.57□□□□□ -1.04
ITGB1-218ENST00000528877 ATP5JP18859 108 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 LACTBP83111 547 aaPredicted RBP8.57□□□□□ -1.04
ITGB1-218ENST00000528877 CAP1Q01518 475 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 GPAT2Q6NUI2 795 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 MRPL14Q6P1L8 145 aaKnown RBP8.57□□□□□ -1.04
ITGB1-218ENST00000528877 C17orf99Q6UX52 265 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 FASTKD5Q7L8L6 764 aaKnown RBP8.57□□□□□ -1.04
ITGB1-218ENST00000528877 CD99L2Q8TCZ2 262 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 ARMC5Q96C12 935 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 ITPKCQ96DU7 683 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 RIOK1Q9BRS2 568 aaKnown RBP8.57□□□□□ -1.04
ITGB1-218ENST00000528877 LRRCC1Q9C099 1032 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 PTPN22Q9Y2R2 807 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 TRIM17Q9Y577 477 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 ZHX2Q9Y6X8 837 aa8.57□□□□□ -1.04
ITGB1-218ENST00000528877 TCRBV5S4A2TA0A5A2 114 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 FAM181BA6NEQ2 426 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
ITGB1-218ENST00000528877 BCRP11274 1271 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 PDE6AP16499 860 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 CYP7A1P22680 504 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 CAP2P40123 477 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 RRP1P56182 461 aaKnown RBP8.56□□□□□ -1.04
ITGB1-218ENST00000528877 NR1H3Q13133 447 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 ARHGEF6Q15052 776 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 TRIM46Q7Z4K8 759 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 MAGEB6Q8N7X4 407 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 HAUS7Q99871 368 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 EFCC1Q9HA90 598 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.56□□□□□ -1.04
ITGB1-218ENST00000528877 AGTPBP1Q9UPW5 1226 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 ZSWIM8A7E2V4 1837 aa8.56□□□□□ -1.04
ITGB1-218ENST00000528877 MYH7P12883 1935 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 FAM196BA6NMK8 535 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 HLA-DOAP06340 250 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 ASNSP08243 561 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 SLURP2P0DP57 97 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 BMP1P13497 986 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 PRMT2P55345 433 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 DYNLL1P63167 89 aaKnown RBP8.55□□□□□ -1.04
ITGB1-218ENST00000528877 RRP1BQ14684 758 aaKnown RBP8.55□□□□□ -1.04
ITGB1-218ENST00000528877 SUZ12Q15022 739 aaKnown RBP8.55□□□□□ -1.04
ITGB1-218ENST00000528877 FOXP4Q8IVH2 680 aaPredicted RBP8.55□□□□□ -1.04
ITGB1-218ENST00000528877 MAPKAPK5Q8IW41 473 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 MIGA1Q8NAN2 632 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 ZNF280CQ8ND82 737 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 TGFBRAP1Q8WUH2 860 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 WDR18Q9BV38 432 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 DCTPP1Q9H773 170 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 PAG1Q9NWQ8 432 aa8.55□□□□□ -1.04
ITGB1-218ENST00000528877 MYH1P12882 1939 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 TRIM75PA6NK02 468 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 GOLIM4O00461 696 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 FBXO45P0C2W1 286 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 MLLT1Q03111 559 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-218ENST00000528877 KIF22Q14807 665 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 INTS6LQ5JSJ4 861 aaKnown RBP8.54□□□□□ -1.04
ITGB1-218ENST00000528877 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-218ENST00000528877 SLC9C2Q5TAH2 1124 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 TATDN1Q6P1N9 297 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 ZNF333Q96JL9 665 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 TSEN34Q9BSV6 310 aaKnown RBP8.54□□□□□ -1.04
ITGB1-218ENST00000528877 ZFAND3Q9H8U3 227 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 AS3MTQ9HBK9 375 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-218ENST00000528877 SERPINB13Q9UIV8 391 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 ZBTB21Q9ULJ3 1066 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 ZNF532Q9HCE3 1301 aa8.54□□□□□ -1.04
ITGB1-218ENST00000528877 PDE4DIPQ5VU43 2346 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 ESPNB1AK53 854 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 ADD2P35612 726 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 USP5P45974 858 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 SOX10P56693 466 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 GABPAQ06546 454 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 PABPC4Q13310 644 aaKnown RBP eCLIP8.53□□□□□ -1.04
ITGB1-218ENST00000528877 UBE3CQ15386 1083 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 FAM110CQ1W6H9 321 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 RNF20Q5VTR2 975 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 CRACR2BQ8N4Y2 399 aaPredicted RBP8.53□□□□□ -1.04
ITGB1-218ENST00000528877 DNAJC2Q99543 621 aaKnown RBP8.53□□□□□ -1.04
ITGB1-218ENST00000528877 CRNKL1Q9BZJ0 848 aaKnown RBP8.53□□□□□ -1.04
ITGB1-218ENST00000528877 ARHGAP39Q9C0H5 1083 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.53□□□□□ -1.04
ITGB1-218ENST00000528877 ECHDC1Q9NTX5 307 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 PALD1Q9ULE6 856 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 PTCH2Q9Y6C5 1203 aa8.53□□□□□ -1.04
ITGB1-218ENST00000528877 MGAMO43451 1857 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 CYP2C8P10632 490 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 CTGFP29279 349 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 HOXA7P31268 230 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms