RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 CYTH3O43739 400 aa14.13□□□□□ -0.15
TRAF3IP2-211ENST00000528599 GNAQP50148 359 aa14.13□□□□□ -0.15
TRAF3IP2-211ENST00000528599 BECN1Q14457 450 aa14.13□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CCL15Q16663 113 aa14.13□□□□□ -0.15
TRAF3IP2-211ENST00000528599 BTNL9Q6UXG8 535 aa14.13□□□□□ -0.15
TRAF3IP2-211ENST00000528599 TANGO6Q9C0B7 1094 aa14.13□□□□□ -0.15
TRAF3IP2-211ENST00000528599 TESPA1A2RU30 521 aaPredicted RBP14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 IGF2BP3O00425 579 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CPLX1O14810 134 aa14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 DHX16O60231 1041 aaKnown RBP14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 IFNAR1P17181 557 aa14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 TM4SF4P48230 202 aa14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SLC4A3P48751 1232 aa14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 MAP2K1Q02750 393 aaPredicted RBP14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CATSPERGQ6ZRH7 1159 aa14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 NSUN7Q8NE18 718 aaKnown RBP14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PHKBQ93100 1093 aa14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 LZTS2Q9BRK4 669 aa14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FEM1BQ9UK73 627 aa14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 AGTPBP1Q9UPW5 1226 aa14.12□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CNTNAP5Q8WYK1 1306 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 MANSC4A6NHS7 340 aaPredicted RBP14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 USP17L15C9J2P7 530 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 USP17L13C9JLJ4 530 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 USP17L11C9JVI0 530 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 USP17L18D6R9N7 530 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 USP17L22D6RA61 530 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 USP17L17D6RBQ6 530 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 USP17L19D6RCP7 530 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 USP17L20D6RJB6 530 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 JAK2O60674 1132 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PLA2G6O60733 806 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SMARCA1P28370 1054 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 HOXA7P31268 230 aaPredicted RBP14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 STAT2P52630 851 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 USP17L24Q0WX57 530 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 IKQ13123 557 aaPredicted RBP14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SYDE2Q5VT97 1194 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 ADGRF4Q8IZF3 695 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CHURC1Q8WUH1 139 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SPZ1Q9BXG8 430 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 RIOX1Q9H6W3 641 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 JMJD4Q9H9V9 463 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 VAT1LQ9HCJ6 419 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PRR12Q9ULL5 1215 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 BRCA2P51587 3418 aa14.11□□□□□ -0.15
TRAF3IP2-211ENST00000528599 hCG_1642624A0A1W2PR95 340 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 BTBD19C9JJ37 291 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FLOT1O75955 427 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CPLX2Q6PUV4 134 aaKnown RBP14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FAM160B2Q86V87 743 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FAM43AQ8N2R8 423 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PIBF1Q8WXW3 757 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 KIFC2Q96AC6 838 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SLF1Q9BQI6 1058 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 LLPHQ9BRT6 129 aaKnown RBP14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 RNF186Q9NXI6 227 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 RLFQ13129 1914 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PTPDC1A2A3K4 754 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FDPSP14324 419 aaKnown RBP14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SNAP25P60880 206 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 ANKRD23Q86SG2 305 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PRPF38AQ8NAV1 312 aaKnown RBP14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SPRYD3Q8NCJ5 442 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SMARCC2Q8TAQ2 1214 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 DDX11Q96FC9 970 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SLC26A6Q9BXS9 759 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 ASCC2Q9H1I8 757 aaPredicted RBP14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 R3HDMLQ9H3Y0 253 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PPP1R9AQ9ULJ8 1098 aa14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 V9GY48 417 aaPredicted RBP14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 BAZ2BQ9UIF8 2168 aaKnown RBP14.1□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PARP14Q460N5 1801 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PDHXO00330 501 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 TRPA1O75762 1119 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CDKL5O76039 1030 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FMNL1O95466 1100 aaPredicted RBP14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 DSG3P32926 999 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 COG2Q14746 738 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 POTEEQ6S8J3 1075 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 IFNL1Q8IU54 200 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 ATG4CQ96DT6 458 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 MTMR8Q96EF0 704 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 INTS4Q96HW7 963 aaKnown RBP14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PIGSQ96S52 555 aa14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 P2RX7Q99572 595 aaKnown RBP14.09□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SPDYE16A6NNV3 312 aaPredicted RBP14.08□□□□□ -0.16
TRAF3IP2-211ENST00000528599 PRPF3O43395 683 aaKnown RBP14.08□□□□□ -0.16
TRAF3IP2-211ENST00000528599 SSRP1Q08945 709 aaKnown RBP14.08□□□□□ -0.16
TRAF3IP2-211ENST00000528599 PABPC4Q13310 644 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAF3IP2-211ENST00000528599 HOMER1Q86YM7 354 aa14.08□□□□□ -0.16
TRAF3IP2-211ENST00000528599 RNF26Q9BY78 433 aaPredicted RBP14.08□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ADAMTS5Q9UNA0 930 aa14.08□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.08□□□□□ -0.16
TRAF3IP2-211ENST00000528599 HSPA8P11142 646 aaKnown RBP14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 INHBEP58166 350 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 IRX3P78415 501 aaPredicted RBP14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 SREBF2Q12772 1141 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms