RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 DPCR1Q3MIW9 517 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 TTC38Q5R3I4 469 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 CC2D2BQ6DHV5 1058 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 ISM2Q6H9L7 571 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 HOMER1Q86YM7 354 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
SOX6-210ENST00000528252 CEP57L1Q8IYX8 460 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 BLIDQ8IZY5 108 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 CNNM3Q8NE01 707 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 RASGRP4Q8TDF6 673 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 CSRNP2Q9H175 543 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 VAT1LQ9HCJ6 419 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 FAM53CQ9NYF3 392 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 DDX60LQ5H9U9 1706 aaKnown RBP9.36□□□□□ -0.91
SOX6-210ENST00000528252 USP17L5A8MUK1 530 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 HLA-DOAP06340 250 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 PTGS1P23219 599 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 SHMT1P34896 483 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 NOP2P46087 812 aaKnown RBP9.36□□□□□ -0.91
SOX6-210ENST00000528252 NOVP48745 357 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 GYS2P54840 703 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 PNOCQ13519 176 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 WWC2Q6AWC2 1192 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 KRBA2Q6ZNG9 492 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 LRRC47Q8N1G4 583 aaKnown RBP9.36□□□□□ -0.91
SOX6-210ENST00000528252 PDILTQ8N807 584 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 ZNF397Q8NF99 534 aaPredicted RBP9.36□□□□□ -0.91
SOX6-210ENST00000528252 LZTS2Q9BRK4 669 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 MRIQ9BWK5 157 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 TRIM5Q9C035 493 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 UBA5Q9GZZ9 404 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 CLIP2Q9UDT6 1046 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 MYH1P12882 1939 aa9.36□□□□□ -0.91
SOX6-210ENST00000528252 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 POLR2DO15514 142 aaKnown RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 FKBP1AP62942 108 aaKnown RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 FBXO38Q6PIJ6 1188 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 TTLL6Q8N841 843 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 ZNF579Q8NAF0 562 aaKnown RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 CCDC112Q8NEF3 446 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 SPZ1Q9BXG8 430 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 SH3GLB2Q9NR46 395 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 PCDHA4Q9UN74 947 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 RGPD3A6NKT7 1758 aaPredicted RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 RGPD4Q7Z3J3 1758 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 YDJCA8MPS7 323 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 MPHOSPH10O00566 681 aaKnown RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 FOXN1O15353 648 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 TNNT1P13805 278 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 HDLBPQ00341 1268 aaKnown RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 LRMPQ12912 555 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 PTGDRQ13258 359 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 METTL16Q86W50 562 aaKnown RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 FOXP4Q8IVH2 680 aaPredicted RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 ZSCAN29Q8IWY8 852 aaPredicted RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 DHX40Q8IX18 779 aaKnown RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 AOPEPQ8N6M6 819 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 NAT10Q9H0A0 1025 aaKnown RBP9.35□□□□□ -0.91
SOX6-210ENST00000528252 BARHL2Q9NY43 387 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 FAM198AQ9UFP1 575 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 SCN9AQ15858 1988 aa9.35□□□□□ -0.91
SOX6-210ENST00000528252 IGKV6D-41A0A0C4DH26 115 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 DDTLA6NHG4 134 aaPredicted RBP9.34□□□□□ -0.91
SOX6-210ENST00000528252 STXBP3O00186 592 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 BMP15O95972 392 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 PDHBP11177 359 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 MCM7P33993 719 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 NLRP12P59046 1061 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 ATP2B2Q01814 1243 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 SUPT20HQ8NEM7 779 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 NEK11Q8NG66 645 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 EPSTI1Q96J88 318 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 SERTAD1Q9UHV2 236 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 FRMPD2Q68DX3 1309 aaPredicted RBP9.34□□□□□ -0.91
SOX6-210ENST00000528252 TRIM66O15016 1216 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 DPEP1P16444 411 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 TRAPPC10P48553 1259 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 GTF2A1P52655 376 aaPredicted RBP9.34□□□□□ -0.91
SOX6-210ENST00000528252 EP400NLQ6ZTU2 488 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 PIAS4Q8N2W9 510 aaPredicted RBP9.34□□□□□ -0.91
SOX6-210ENST00000528252 CCDC148Q8NFR7 591 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 RRP36Q96EU6 259 aaKnown RBP9.34□□□□□ -0.91
SOX6-210ENST00000528252 PIGSQ96S52 555 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 TDRD3Q9H7E2 651 aaKnown RBP9.34□□□□□ -0.91
SOX6-210ENST00000528252 DNAJC18Q9H819 358 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 ZNF446Q9NWS9 450 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 TUBE1Q9UJT0 475 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 SERPINA10Q9UK55 444 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 PCDHA5Q9Y5H7 936 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 PLIN4Q96Q06 1357 aa9.34□□□□□ -0.91
SOX6-210ENST00000528252 CCDC194A0A1B0GVG4 234 aa9.33□□□□□ -0.92
SOX6-210ENST00000528252 VWA3AA6NCI4 1184 aa9.33□□□□□ -0.92
SOX6-210ENST00000528252 TTLL1O95922 423 aa9.33□□□□□ -0.92
SOX6-210ENST00000528252 ZNF75DP51815 510 aa9.33□□□□□ -0.92
SOX6-210ENST00000528252 NAPAP54920 295 aa9.33□□□□□ -0.92
SOX6-210ENST00000528252 ATP2C1P98194 919 aaPredicted RBP9.33□□□□□ -0.92
SOX6-210ENST00000528252 CCDC93Q567U6 631 aa9.33□□□□□ -0.92
SOX6-210ENST00000528252 SH3BP5LQ7L8J4 393 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms