RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 ERICH4A6NGS2 130 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 CASP14P31944 242 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 TBX2Q13207 712 aaPredicted RBP13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 NR1I3Q14994 352 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 RAD9BQ6WBX8 426 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 TEX11Q8IYF3 940 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 PUF60Q9UHX1 559 aaKnown RBP13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 BCORQ6W2J9 1755 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 CHD4Q14839 1912 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 POLR3GO15318 223 aaPredicted RBP13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 TSPY3P0CV98 308 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 TSPY8P0CW00 308 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 KRT222Q8N1A0 295 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 CNTNAP5Q8WYK1 1306 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 CASZ1Q86V15 1759 aa13.54□□□□□ -0.24
CHMP1B-201ENST00000526991 AKR1B15C9JRZ8 316 aaPredicted RBP13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 SCG2P13521 617 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 CHRNA5P30532 468 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 FAM205AQ6ZU69 1335 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 RBM17Q96I25 401 aaKnown RBP13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 MTRQ99707 1265 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 NOL10Q9BSC4 688 aaKnown RBP13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 IL17RBQ9NRM6 502 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 KCND1Q9NSA2 647 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 ANAPC4Q9UJX5 808 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 TRIM49BA6NDI0 452 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 N4BP3O15049 544 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 TCP10Q12799 353 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 NT5DC1Q5TFE4 455 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 KANK3Q6NY19 840 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 HEATR3Q7Z4Q2 680 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 BRIP1Q9BX63 1249 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 MORC2Q9Y6X9 1032 aaPredicted RBP13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 PPP1R3GB7ZBB8 358 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 RNF225M0QZC1 329 aaPredicted RBP13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 FXR1P51114 621 aaKnown RBP eCLIP13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 SPATA1Q5VX52 437 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 TYW1BQ6NUM6 668 aa13.53□□□□□ -0.24
CHMP1B-201ENST00000526991 ECM29Q5VYK3 1845 aa13.52□□□□□ -0.24
CHMP1B-201ENST00000526991 SHROOM1Q2M3G4 852 aaPredicted RBP13.52□□□□□ -0.24
CHMP1B-201ENST00000526991 WDR66Q8TBY9 1149 aa13.52□□□□□ -0.24
CHMP1B-201ENST00000526991 CCDC34Q96HJ3 373 aa13.52□□□□□ -0.24
CHMP1B-201ENST00000526991 KAT14Q9H8E8 782 aa13.52□□□□□ -0.24
CHMP1B-201ENST00000526991 TFR2Q9UP52 801 aa13.52□□□□□ -0.24
CHMP1B-201ENST00000526991 CCP110O43303 1012 aa13.52□□□□□ -0.25
CHMP1B-201ENST00000526991 SCAF8Q9UPN6 1271 aaKnown RBP13.52□□□□□ -0.25
CHMP1B-201ENST00000526991 DOCK2Q92608 1830 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 A0A1B0GTH6 734 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 PPEF1O14829 653 aaPredicted RBP13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 STX10O60499 249 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 PSEN1P49768 467 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 RBM5P52756 815 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 INF2Q27J81 1249 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 RCSD1Q6JBY9 416 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 APTXQ7Z2E3 356 aaKnown RBP13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 KIAA0825Q8IV33 1275 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 PNMA1Q8ND90 353 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 UBA5Q9GZZ9 404 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 RBM28Q9NW13 759 aaKnown RBP13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 LEMD3Q9Y2U8 911 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 PHLPP2Q6ZVD8 1323 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 ERCC3P19447 782 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 PPP2R3AQ06190 1150 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 TNFRSF25Q93038 417 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 ARAP2Q8WZ64 1704 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 RREB1Q92766 1687 aa13.51□□□□□ -0.25
CHMP1B-201ENST00000526991 TADA3O75528 432 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 H2AFXP16104 143 aaPredicted RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 KRT31Q15323 416 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 ZNF569Q5MCW4 686 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 IQUBQ8NA54 791 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 SPATA20Q8TB22 786 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 FERMT2Q96AC1 680 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 NUP88Q99567 741 aaPredicted RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 ZC3H12CQ9C0D7 883 aaKnown RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 ZCCHC17Q9NP64 241 aaKnown RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 ADD3Q9UEY8 706 aaKnown RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 FRMPD2Q68DX3 1309 aaPredicted RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 IRS2Q9Y4H2 1338 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 ERCC5P28715 1186 aaPredicted RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 ATP2C1P98194 919 aaPredicted RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 C12orf60Q5U649 245 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 SPTY2D1Q68D10 685 aaPredicted RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 TMCO3Q6UWJ1 677 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 LRRC47Q8N1G4 583 aaKnown RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 TRIML1Q8N9V2 468 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 NELFBQ8WX92 580 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 ATP8A2Q9NTI2 1148 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 SCN7AQ01118 1682 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 BAG3O95817 575 aa13.5□□□□□ -0.25
CHMP1B-201ENST00000526991 STAT6P42226 847 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms