RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 PLEKHH3Q7Z736 793 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 RASEFQ8IZ41 740 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 ABRAQ8N0Z2 381 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 USP6NLQ92738 828 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 ABHD8Q96I13 439 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 HPS5Q9UPZ3 1129 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 PTCH2Q9Y6C5 1203 aa20.23■□□□□ 0.83
LMX1B-203ENST00000526117 IFIT3O14879 490 aaKnown RBP20.22■□□□□ 0.83
LMX1B-203ENST00000526117 ZBED4O75132 1171 aa20.22■□□□□ 0.83
LMX1B-203ENST00000526117 HMGB1P09429 215 aaKnown RBP20.22■□□□□ 0.83
LMX1B-203ENST00000526117 ASPRV1Q53RT3 343 aa20.22■□□□□ 0.83
LMX1B-203ENST00000526117 MORN1Q5T089 497 aa20.22■□□□□ 0.83
LMX1B-203ENST00000526117 KCTD1Q719H9 257 aa20.22■□□□□ 0.83
LMX1B-203ENST00000526117 TMTC2Q8N394 836 aa20.22■□□□□ 0.83
LMX1B-203ENST00000526117 PXYLP1Q8TE99 480 aa20.22■□□□□ 0.83
LMX1B-203ENST00000526117 KIFC2Q96AC6 838 aa20.22■□□□□ 0.83
LMX1B-203ENST00000526117 ARMC5Q96C12 935 aa20.22■□□□□ 0.83
LMX1B-203ENST00000526117 TEX13BQ9BXU2 312 aa20.22■□□□□ 0.83
LMX1B-203ENST00000526117 USP26Q9BXU7 913 aa20.22■□□□□ 0.83
LMX1B-203ENST00000526117 SLC15A5A6NIM6 579 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 XRCC5P13010 732 aaKnown RBP20.21■□□□□ 0.83
LMX1B-203ENST00000526117 STAT3P40763 770 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 LIFRP42702 1097 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 FLT3LGP49771 235 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 GRB14Q14449 540 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 WTAPQ15007 396 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 CCDC96Q2M329 555 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 RASGRP2Q7LDG7 609 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 CCAR1Q8IX12 1150 aaKnown RBP20.21■□□□□ 0.83
LMX1B-203ENST00000526117 SLAIN1Q8ND83 568 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 NEK1Q96PY6 1258 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 MAP3K14Q99558 947 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 PNMA2Q9UL42 364 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 PRR12Q9ULL5 1215 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 GABRQQ9UN88 632 aa20.21■□□□□ 0.83
LMX1B-203ENST00000526117 PRC1O43663 620 aa20.2■□□□□ 0.82
LMX1B-203ENST00000526117 ERCC3P19447 782 aa20.2■□□□□ 0.82
LMX1B-203ENST00000526117 PTPREP23469 700 aa20.2■□□□□ 0.82
LMX1B-203ENST00000526117 EXOSC10Q01780 885 aaKnown RBP20.2■□□□□ 0.82
LMX1B-203ENST00000526117 TMEM67Q5HYA8 995 aa20.2■□□□□ 0.82
LMX1B-203ENST00000526117 RAET1EQ8TD07 263 aa20.2■□□□□ 0.82
LMX1B-203ENST00000526117 NUDT12Q9BQG2 462 aa20.2■□□□□ 0.82
LMX1B-203ENST00000526117 RANBP17Q9H2T7 1088 aaKnown RBP20.2■□□□□ 0.82
LMX1B-203ENST00000526117 LY9Q9HBG7 655 aa20.2■□□□□ 0.82
LMX1B-203ENST00000526117 CENPFP49454 3210 aa20.19■□□□□ 0.82
LMX1B-203ENST00000526117 SH2B2O14492 632 aaPredicted RBP20.19■□□□□ 0.82
LMX1B-203ENST00000526117 HOXC6P09630 235 aa20.19■□□□□ 0.82
LMX1B-203ENST00000526117 SYDE2Q5VT97 1194 aa20.19■□□□□ 0.82
LMX1B-203ENST00000526117 NBPF11Q86T75 865 aa20.19■□□□□ 0.82
LMX1B-203ENST00000526117 SGMS1Q86VZ5 419 aa20.19■□□□□ 0.82
LMX1B-203ENST00000526117 TRMT44Q8IYL2 757 aaKnown RBP20.19■□□□□ 0.82
LMX1B-203ENST00000526117 SNX14Q9Y5W7 946 aa20.19■□□□□ 0.82
LMX1B-203ENST00000526117 IVNS1ABPQ9Y6Y0 642 aa20.19■□□□□ 0.82
LMX1B-203ENST00000526117 TROAPQ12815 778 aa20.18■□□□□ 0.82
LMX1B-203ENST00000526117 IKQ13123 557 aaPredicted RBP20.18■□□□□ 0.82
LMX1B-203ENST00000526117 PLS1Q14651 629 aa20.18■□□□□ 0.82
LMX1B-203ENST00000526117 TKFCQ3LXA3 575 aa20.18■□□□□ 0.82
LMX1B-203ENST00000526117 ADCK5Q3MIX3 580 aa20.18■□□□□ 0.82
LMX1B-203ENST00000526117 SLC9C1Q4G0N8 1177 aa20.18■□□□□ 0.82
LMX1B-203ENST00000526117 DHX32Q7L7V1 743 aaKnown RBP20.18■□□□□ 0.82
LMX1B-203ENST00000526117 FBXL16Q8N461 479 aa20.18■□□□□ 0.82
LMX1B-203ENST00000526117 CTDP1Q9Y5B0 961 aaPredicted RBP20.18■□□□□ 0.82
LMX1B-203ENST00000526117 ZNF536O15090 1300 aa20.18■□□□□ 0.82
LMX1B-203ENST00000526117 DDAH1O94760 285 aa20.17■□□□□ 0.82
LMX1B-203ENST00000526117 PARP1P09874 1014 aaKnown RBP20.17■□□□□ 0.82
LMX1B-203ENST00000526117 GRK4P32298 578 aa20.17■□□□□ 0.82
LMX1B-203ENST00000526117 RGS2P41220 211 aa20.17■□□□□ 0.82
LMX1B-203ENST00000526117 COL9A3Q14050 684 aaPredicted RBP20.17■□□□□ 0.82
LMX1B-203ENST00000526117 SNRNP48Q6IEG0 339 aaKnown RBP20.17■□□□□ 0.82
LMX1B-203ENST00000526117 TTBK2Q6IQ55 1244 aa20.17■□□□□ 0.82
LMX1B-203ENST00000526117 CHST3Q7LGC8 479 aa20.17■□□□□ 0.82
LMX1B-203ENST00000526117 CHST13Q8NET6 341 aa20.17■□□□□ 0.82
LMX1B-203ENST00000526117 ZNF333Q96JL9 665 aa20.17■□□□□ 0.82
LMX1B-203ENST00000526117 APBA2Q99767 749 aa20.17■□□□□ 0.82
LMX1B-203ENST00000526117 CWC22Q9HCG8 908 aaKnown RBP20.17■□□□□ 0.82
LMX1B-203ENST00000526117 FBXO40Q9UH90 709 aa20.17■□□□□ 0.82
LMX1B-203ENST00000526117 FRMPD2Q68DX3 1309 aaPredicted RBP20.17■□□□□ 0.82
LMX1B-203ENST00000526117 DOCK3Q8IZD9 2030 aa20.17■□□□□ 0.82
LMX1B-203ENST00000526117 PALM3A6NDB9 673 aaPredicted RBP20.16■□□□□ 0.82
LMX1B-203ENST00000526117 ICAM1P05362 532 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 PSMA5P28066 241 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 MAP2K5Q13163 448 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 GRM4Q14833 912 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
LMX1B-203ENST00000526117 CATIPQ7Z7H3 387 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 NCAPG2Q86XI2 1143 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 IL17RAQ96F46 866 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 SENP2Q9HC62 589 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 GPCPD1Q9NPB8 672 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 MAD2L2Q9UI95 211 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 ISY1Q9ULR0 285 aaKnown RBP20.16■□□□□ 0.82
LMX1B-203ENST00000526117 MTMR7Q9Y216 660 aa20.16■□□□□ 0.82
LMX1B-203ENST00000526117 ADCY3O60266 1144 aa20.15■□□□□ 0.82
LMX1B-203ENST00000526117 IGHA2P01877 340 aa20.15■□□□□ 0.82
LMX1B-203ENST00000526117 FCER1AP12319 257 aa20.15■□□□□ 0.82
LMX1B-203ENST00000526117 SLC16A2P36021 539 aa20.15■□□□□ 0.82
LMX1B-203ENST00000526117 TM6SF1Q9BZW5 370 aa20.15■□□□□ 0.82
LMX1B-203ENST00000526117 MAF1Q9H063 256 aa20.15■□□□□ 0.82
LMX1B-203ENST00000526117 RAVER2Q9HCJ3 691 aaKnown RBP20.15■□□□□ 0.82
LMX1B-203ENST00000526117 RBBP6Q7Z6E9 1792 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms