RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TMOD3Q9NYL9 352 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 ZBTB1Q9Y2K1 713 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 LUC7L2Q9Y383 392 aaKnown RBP14.79□□□□□ -0.04
CAPN1-202ENST00000524773 MAGEA9P43362 315 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 IFIT1BQ5T764 474 aaKnown RBP14.79□□□□□ -0.04
CAPN1-202ENST00000524773 PIGBQ92521 554 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 NACAP1Q9BZK3 213 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 MLXIPQ9HAP2 919 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 DMGDHQ9UI17 866 aaKnown RBP14.79□□□□□ -0.04
CAPN1-202ENST00000524773 PCDH11XQ9BZA7 1347 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 PCDH11YQ9BZA8 1340 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 IDEP14735 1019 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 NLRP5P59047 1200 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 SEC23AQ15436 765 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 GIGYF2Q6Y7W6 1299 aaKnown RBP14.78□□□□□ -0.04
CAPN1-202ENST00000524773 SND1Q7KZF4 910 aaKnown RBP eCLIP14.78□□□□□ -0.04
CAPN1-202ENST00000524773 SRBD1Q8N5C6 995 aaKnown RBP14.78□□□□□ -0.04
CAPN1-202ENST00000524773 OR8K1Q8NGG5 319 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 COG1Q8WTW3 980 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 LPIN2Q92539 896 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 CRACR2AQ9BSW2 395 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 MYH7P12883 1935 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 CCDC196A0A1B0GTZ2 297 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 NCK2O43639 380 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 EIF5P55010 431 aaKnown RBP14.78□□□□□ -0.04
CAPN1-202ENST00000524773 FUT2Q10981 343 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 KCTD16Q68DU8 428 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 MB21D1Q8N884 522 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 LRRC15Q8TF66 581 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 TRIM47Q96LD4 638 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 GBP3Q9H0R5 595 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 JRKLQ9Y4A0 524 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 CDHR2Q9BYE9 1310 aa14.78□□□□□ -0.04
CAPN1-202ENST00000524773 NUP188Q5SRE5 1749 aa14.77□□□□□ -0.04
CAPN1-202ENST00000524773 TRIM21P19474 475 aaKnown RBP14.77□□□□□ -0.04
CAPN1-202ENST00000524773 GYG1P46976 350 aa14.77□□□□□ -0.04
CAPN1-202ENST00000524773 CORO7P57737 925 aa14.77□□□□□ -0.04
CAPN1-202ENST00000524773 ALX1Q15699 326 aa14.77□□□□□ -0.04
CAPN1-202ENST00000524773 RWDD2AQ9UIY3 292 aa14.77□□□□□ -0.04
CAPN1-202ENST00000524773 FBXW10Q5XX13 1052 aa14.77□□□□□ -0.05
CAPN1-202ENST00000524773 WDR93Q6P2C0 686 aa14.77□□□□□ -0.05
CAPN1-202ENST00000524773 SH2D3CQ8N5H7 860 aa14.77□□□□□ -0.05
CAPN1-202ENST00000524773 KAT2BQ92831 832 aa14.77□□□□□ -0.05
CAPN1-202ENST00000524773 SLC4A9Q96Q91 983 aa14.77□□□□□ -0.05
CAPN1-202ENST00000524773 LRRC1Q9BTT6 524 aa14.77□□□□□ -0.05
CAPN1-202ENST00000524773 BTG4Q9NY30 223 aa14.77□□□□□ -0.05
CAPN1-202ENST00000524773 LRWD1Q9UFC0 647 aa14.77□□□□□ -0.05
CAPN1-202ENST00000524773 MAP3K15Q6ZN16 1313 aa14.77□□□□□ -0.05
CAPN1-202ENST00000524773 RASSF10A6NK89 507 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 UQCRFS1P1P0C7P4 283 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 STAT6P42226 847 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 ATP1A2P50993 1020 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 CCDC51Q96ER9 411 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 ZSCAN10Q96SZ4 725 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-202ENST00000524773 RNF26Q9BY78 433 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-202ENST00000524773 ATRNO75882 1429 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 ERVV-2B6SEH9 535 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 EXOC5O00471 708 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 RNASE9P60153 205 aaKnown RBP14.76□□□□□ -0.05
CAPN1-202ENST00000524773 ICE2Q659A1 982 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 ANKRD20A12PQ8NF67 263 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 NHEJ1Q9H9Q4 299 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-202ENST00000524773 MED4Q9NPJ6 270 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 CAPN6Q9Y6Q1 641 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 ITIH6Q6UXX5 1313 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 FAM205AQ6ZU69 1335 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 KCPQ6ZWJ8 1503 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 ROBO1Q9Y6N7 1651 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 FAM170AA1A519 330 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 GOLGA6CA6NDK9 693 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 ZNF263O14978 683 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 PPFIA4O75335 1185 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 GOLGA6DP0CG33 693 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 CYP2D6P10635 497 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 SLC5A1P13866 664 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 XBP1P17861 261 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 FGFR2P21802 821 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 ATP2C1P98194 919 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-202ENST00000524773 CATIPQ7Z7H3 387 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 PLA2G12BQ9BX93 195 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 CPVLQ9H3G5 476 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 GOLGA6AQ9NYA3 693 aa14.76□□□□□ -0.05
CAPN1-202ENST00000524773 PARP4Q9UKK3 1724 aaKnown RBP14.76□□□□□ -0.05
CAPN1-202ENST00000524773 LRRC10BA6NIK2 292 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 MOCS3O95396 460 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 IBSPP21815 317 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-202ENST00000524773 FECHP22830 423 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 ZNF658Q5TYW1 1059 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-202ENST00000524773 NFRKBQ6P4R8 1299 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 GPATCH11Q8N954 259 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 ESR2Q92731 530 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 FERMT2Q96AC1 680 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 ARL8AQ96BM9 186 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 ESYT3A0FGR9 886 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 GOLGA6BA6NDN3 693 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 ZSCAN5CA6NGD5 496 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-202ENST00000524773 PSMD14O00487 310 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 CCDC96Q2M329 555 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 TSR1Q2NL82 804 aaKnown RBP14.75□□□□□ -0.05
CAPN1-202ENST00000524773 TYW1BQ6NUM6 668 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms