RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 DIS3Q9Y2L1 958 aaKnown RBP9.13□□□□□ -0.95
CPNE3-206ENST00000523469 PCDHA11Q9Y5I1 949 aa9.13□□□□□ -0.95
CPNE3-206ENST00000523469 CC2D2AQ9P2K1 1620 aa9.13□□□□□ -0.95
CPNE3-206ENST00000523469 GSNP06396 782 aa9.12□□□□□ -0.95
CPNE3-206ENST00000523469 SLC23A3Q6PIS1 610 aa9.12□□□□□ -0.95
CPNE3-206ENST00000523469 RNF111Q6ZNA4 994 aa9.12□□□□□ -0.95
CPNE3-206ENST00000523469 FIBCD1Q8N539 461 aa9.12□□□□□ -0.95
CPNE3-206ENST00000523469 USHBP1Q8N6Y0 703 aa9.12□□□□□ -0.95
CPNE3-206ENST00000523469 LINC00116Q8NCU8 138 aa9.12□□□□□ -0.95
CPNE3-206ENST00000523469 PI4K2BQ8TCG2 481 aa9.12□□□□□ -0.95
CPNE3-206ENST00000523469 FGD4Q96M96 766 aa9.12□□□□□ -0.95
CPNE3-206ENST00000523469 DNAJC2Q99543 621 aaKnown RBP9.12□□□□□ -0.95
CPNE3-206ENST00000523469 SIRPGQ9P1W8 387 aa9.12□□□□□ -0.95
CPNE3-206ENST00000523469 MEIS1O00470 390 aa9.11□□□□□ -0.95
CPNE3-206ENST00000523469 PCBP3P57721 371 aaKnown RBP9.11□□□□□ -0.95
CPNE3-206ENST00000523469 MRM1Q6IN84 353 aaKnown RBP9.11□□□□□ -0.95
CPNE3-206ENST00000523469 EEPD1Q7L9B9 569 aa9.11□□□□□ -0.95
CPNE3-206ENST00000523469 RCC1LQ96I51 464 aaKnown RBP9.11□□□□□ -0.95
CPNE3-206ENST00000523469 NOL6Q9H6R4 1146 aaKnown RBP9.11□□□□□ -0.95
CPNE3-206ENST00000523469 SUGT1Q9Y2Z0 365 aa9.11□□□□□ -0.95
CPNE3-206ENST00000523469 SF3B6Q9Y3B4 125 aaKnown RBP9.11□□□□□ -0.95
CPNE3-206ENST00000523469 SSU72P8A0A1W2PR75 194 aa9.1□□□□□ -0.95
CPNE3-206ENST00000523469 SUSD5O60279 629 aa9.1□□□□□ -0.95
CPNE3-206ENST00000523469 BMP8BP34820 402 aa9.1□□□□□ -0.95
CPNE3-206ENST00000523469 CTSKP43235 329 aa9.1□□□□□ -0.95
CPNE3-206ENST00000523469 CWF19L1Q69YN2 538 aaKnown RBP9.1□□□□□ -0.95
CPNE3-206ENST00000523469 ABI1Q8IZP0 508 aa9.1□□□□□ -0.95
CPNE3-206ENST00000523469 ADCY4Q8NFM4 1077 aa9.1□□□□□ -0.95
CPNE3-206ENST00000523469 EPN3Q9H201 632 aa9.1□□□□□ -0.95
CPNE3-206ENST00000523469 TCFL5Q9UL49 500 aa9.1□□□□□ -0.95
CPNE3-206ENST00000523469 BICRAQ9NZM4 1560 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 SYPP08247 313 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 TEKQ02763 1124 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 SERINC3Q13530 473 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 CRTC3Q6UUV7 619 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 ARHGEF39Q8N4T4 335 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 ZNF513Q8N8E2 541 aaPredicted RBP9.09□□□□□ -0.95
CPNE3-206ENST00000523469 PMFBP1Q8TBY8 1022 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 ALPK1Q96QP1 1244 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 FOXP3Q9BZS1 431 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 APEX2Q9UBZ4 518 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 MSRB2Q9Y3D2 182 aa9.09□□□□□ -0.95
CPNE3-206ENST00000523469 OAS3Q9Y6K5 1087 aaKnown RBP9.09□□□□□ -0.95
CPNE3-206ENST00000523469 H0Y8X5 98 aa9.08□□□□□ -0.96
CPNE3-206ENST00000523469 VAV1P15498 845 aa9.08□□□□□ -0.96
CPNE3-206ENST00000523469 ZNF792Q3KQV3 632 aa9.08□□□□□ -0.96
CPNE3-206ENST00000523469 SYTL4Q96C24 671 aaPredicted RBP9.08□□□□□ -0.96
CPNE3-206ENST00000523469 CCDC120Q96HB5 630 aa9.08□□□□□ -0.96
CPNE3-206ENST00000523469 PRDM7Q9NQW5 492 aa9.08□□□□□ -0.96
CPNE3-206ENST00000523469 MBNL3Q9NUK0 354 aaKnown RBP9.08□□□□□ -0.96
CPNE3-206ENST00000523469 CGGBP1Q9UFW8 167 aaPredicted RBP9.08□□□□□ -0.96
CPNE3-206ENST00000523469 RNASE1P07998 156 aaKnown RBP9.07□□□□□ -0.96
CPNE3-206ENST00000523469 ENDOUP21128 410 aaKnown RBP9.07□□□□□ -0.96
CPNE3-206ENST00000523469 PPP2R5DQ14738 602 aa9.07□□□□□ -0.96
CPNE3-206ENST00000523469 SV2CQ496J9 727 aa9.07□□□□□ -0.96
CPNE3-206ENST00000523469 CRACR2BQ8N4Y2 399 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-206ENST00000523469 BVESQ8NE79 360 aa9.07□□□□□ -0.96
CPNE3-206ENST00000523469 ZDHHC15Q96MV8 337 aa9.07□□□□□ -0.96
CPNE3-206ENST00000523469 CCDC113Q9H0I3 377 aa9.07□□□□□ -0.96
CPNE3-206ENST00000523469 SLAMF8Q9P0V8 285 aa9.07□□□□□ -0.96
CPNE3-206ENST00000523469 ADAMTS6Q9UKP5 1117 aa9.07□□□□□ -0.96
CPNE3-206ENST00000523469 AKT3Q9Y243 479 aa9.07□□□□□ -0.96
CPNE3-206ENST00000523469 ZNF281Q9Y2X9 895 aa9.07□□□□□ -0.96
CPNE3-206ENST00000523469 NOP56O00567 594 aaKnown RBP9.06□□□□□ -0.96
CPNE3-206ENST00000523469 ZNF205O95201 554 aa9.06□□□□□ -0.96
CPNE3-206ENST00000523469 NOP2P46087 812 aaKnown RBP9.06□□□□□ -0.96
CPNE3-206ENST00000523469 POU4F1Q01851 419 aa9.06□□□□□ -0.96
CPNE3-206ENST00000523469 GRB10Q13322 594 aa9.06□□□□□ -0.96
CPNE3-206ENST00000523469 POMZP3Q6PJE2 187 aa9.06□□□□□ -0.96
CPNE3-206ENST00000523469 LRP10Q7Z4F1 713 aa9.06□□□□□ -0.96
CPNE3-206ENST00000523469 ST13P5Q8NFI4 369 aaPredicted RBP9.06□□□□□ -0.96
CPNE3-206ENST00000523469 MKL1Q969V6 931 aa9.06□□□□□ -0.96
CPNE3-206ENST00000523469 PPP1R14AQ96A00 147 aa9.06□□□□□ -0.96
CPNE3-206ENST00000523469 EMC9Q9Y3B6 208 aa9.06□□□□□ -0.96
CPNE3-206ENST00000523469 RPL10P27635 214 aaKnown RBP9.05□□□□□ -0.96
CPNE3-206ENST00000523469 SLC10A6Q3KNW5 377 aa9.05□□□□□ -0.96
CPNE3-206ENST00000523469 SLC12A9Q9BXP2 914 aa9.05□□□□□ -0.96
CPNE3-206ENST00000523469 USP35Q9P2H5 1018 aa9.05□□□□□ -0.96
CPNE3-206ENST00000523469 TMEM59LQ9UK28 342 aa9.05□□□□□ -0.96
CPNE3-206ENST00000523469 DNAJC25-GNG10A0A024R161 153 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 AGRPO00253 132 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 PDPK1O15530 556 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 FKTNO75072 461 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 RASGRF1Q13972 1273 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 RALGPS1Q5JS13 557 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 WAPLQ7Z5K2 1190 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 LRRN4CLQ8ND94 238 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 ZNF669Q96BR6 464 aaPredicted RBP9.04□□□□□ -0.96
CPNE3-206ENST00000523469 OSBPL2Q9H1P3 480 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 ADAMTS10Q9H324 1103 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 RC3H2Q9HBD1 1191 aaKnown RBP9.04□□□□□ -0.96
CPNE3-206ENST00000523469 LRP2BPQ9P2M1 347 aa9.04□□□□□ -0.96
CPNE3-206ENST00000523469 TMEM82A0PJX8 343 aa9.03□□□□□ -0.96
CPNE3-206ENST00000523469 AMPD2Q01433 879 aa9.03□□□□□ -0.96
CPNE3-206ENST00000523469 DUSP4Q13115 394 aa9.03□□□□□ -0.96
CPNE3-206ENST00000523469 RTP2Q5QGT7 225 aa9.03□□□□□ -0.96
CPNE3-206ENST00000523469 CBLL1Q75N03 491 aa9.03□□□□□ -0.96
CPNE3-206ENST00000523469 DEPDC7Q96QD5 511 aa9.03□□□□□ -0.96
CPNE3-206ENST00000523469 ADGRE2Q9UHX3 823 aa9.03□□□□□ -0.96
CPNE3-206ENST00000523469 IQCA1LA6NCM1 817 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms