RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 CLSTN1O94985 981 aa6.34□□□□□ -1.39
SKP1-210ENST00000522855 AUHQ13825 339 aaKnown RBP6.34□□□□□ -1.39
SKP1-210ENST00000522855 ARHGAP27Q6ZUM4 889 aa6.34□□□□□ -1.39
SKP1-210ENST00000522855 SPACA3Q8IXA5 215 aa6.34□□□□□ -1.39
SKP1-210ENST00000522855 FAM177A1Q8N128 213 aaPredicted RBP6.34□□□□□ -1.39
SKP1-210ENST00000522855 RIN3Q8TB24 985 aa6.34□□□□□ -1.39
SKP1-210ENST00000522855 SGSM3Q96HU1 749 aa6.34□□□□□ -1.39
SKP1-210ENST00000522855 HRASLS5Q96KN8 279 aa6.34□□□□□ -1.39
SKP1-210ENST00000522855 APBA2Q99767 749 aa6.34□□□□□ -1.39
SKP1-210ENST00000522855 ASCC2Q9H1I8 757 aaPredicted RBP6.34□□□□□ -1.39
SKP1-210ENST00000522855 CWC22Q9HCG8 908 aaKnown RBP6.34□□□□□ -1.39
SKP1-210ENST00000522855 ABCC9O60706 1549 aa6.34□□□□□ -1.39
SKP1-210ENST00000522855 TMEM265A0A087WTH1 108 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 CD247P20963 164 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 NBPF9Q3BBW0 867 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 SV2CQ496J9 727 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 C2orf27AQ580R0 203 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 DCAF15Q66K64 600 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 ADAT2Q7Z6V5 191 aaKnown RBP6.33□□□□□ -1.4
SKP1-210ENST00000522855 ATG4DQ86TL0 474 aaPredicted RBP6.33□□□□□ -1.4
SKP1-210ENST00000522855 MFSD4AQ8N468 514 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 LRRN4CLQ8ND94 238 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 SH3TC2Q8TF17 1288 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 THAP3Q8WTV1 239 aaPredicted RBP6.33□□□□□ -1.4
SKP1-210ENST00000522855 VWCEQ96DN2 955 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 LRP2BPQ9P2M1 347 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 PFDN2Q9UHV9 154 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 ZMYM5Q9UJ78 669 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 FBXL21Q9UKT6 434 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 SUGT1Q9Y2Z0 365 aa6.33□□□□□ -1.4
SKP1-210ENST00000522855 KDM2BQ8NHM5 1336 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 NOP56O00567 594 aaKnown RBP6.32□□□□□ -1.4
SKP1-210ENST00000522855 ENPP3O14638 875 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 ZNF865P0CJ78 1059 aaPredicted RBP6.32□□□□□ -1.4
SKP1-210ENST00000522855 JAG1P78504 1218 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 AOC3Q16853 763 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 NKPD1Q17RQ9 610 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 LONRF2Q1L5Z9 754 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 TAF7LQ5H9L4 462 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 ZC3H12BQ5HYM0 836 aaKnown RBP6.32□□□□□ -1.4
SKP1-210ENST00000522855 NOL9Q5SY16 702 aaKnown RBP6.32□□□□□ -1.4
SKP1-210ENST00000522855 POMZP3Q6PJE2 187 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 SPATC1Q76KD6 591 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 NLGN1Q8N2Q7 840 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 DTWD2Q8NBA8 298 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 PIWIL2Q8TC59 973 aaKnown RBP6.32□□□□□ -1.4
SKP1-210ENST00000522855 PPP1R14AQ96A00 147 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 RNPC3Q96LT9 517 aaKnown RBP6.32□□□□□ -1.4
SKP1-210ENST00000522855 RC3H2Q9HBD1 1191 aaKnown RBP6.32□□□□□ -1.4
SKP1-210ENST00000522855 GP6Q9HCN6 339 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 SNX11Q9Y5W9 270 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 FHOD1Q9Y613 1164 aa6.32□□□□□ -1.4
SKP1-210ENST00000522855 CADPSQ9ULU8 1353 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 A0A087WZG4 1122 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 CDC45O75419 566 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 CBX7O95931 251 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 C8AP07357 584 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 ITIH2P19823 946 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 HSD3B2P26439 372 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 HOMER1Q86YM7 354 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 ZSWIM2Q8NEG5 633 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 APPBP2Q92624 585 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 FGD4Q96M96 766 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 SPATA9Q9BWV2 254 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 SUSD2Q9UGT4 822 aa6.31□□□□□ -1.4
SKP1-210ENST00000522855 UNC13AQ9UPW8 1703 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 PITPNM2Q9BZ72 1349 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 FAM155AB1AL88 458 aaPredicted RBP6.3□□□□□ -1.4
SKP1-210ENST00000522855 SHOXO15266 292 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 DIAPH1O60610 1272 aaKnown RBP6.3□□□□□ -1.4
SKP1-210ENST00000522855 TMEM67Q5HYA8 995 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 ANGEL2Q5VTE6 544 aaKnown RBP6.3□□□□□ -1.4
SKP1-210ENST00000522855 LILRB2Q8N423 598 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 JMYQ8N9B5 988 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 BVESQ8NE79 360 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 FLAD1Q8NFF5 587 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 RCC1LQ96I51 464 aaKnown RBP6.3□□□□□ -1.4
SKP1-210ENST00000522855 SLC26A8Q96RN1 970 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 DSCC1Q9BVC3 393 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 ZNF451Q9Y4E5 1061 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 DCAF1Q9Y4B6 1507 aa6.3□□□□□ -1.4
SKP1-210ENST00000522855 SIGLEC6O43699 453 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 NMIQ13287 307 aaPredicted RBP6.29□□□□□ -1.4
SKP1-210ENST00000522855 HSP90AA2PQ14568 343 aaPredicted RBP6.29□□□□□ -1.4
SKP1-210ENST00000522855 CLEC16AQ2KHT3 1053 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 SLC23A3Q6PIS1 610 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 ZNF227Q86WZ6 799 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 SYNPOQ8N3V7 929 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 ENOX1Q8TC92 643 aaKnown RBP6.29□□□□□ -1.4
SKP1-210ENST00000522855 SYTL5Q8TDW5 730 aaPredicted RBP6.29□□□□□ -1.4
SKP1-210ENST00000522855 Q96M66 194 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 IPO9Q96P70 1041 aaKnown RBP6.29□□□□□ -1.4
SKP1-210ENST00000522855 PRDM14Q9GZV8 571 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 TRIT1Q9H3H1 467 aaKnown RBP6.29□□□□□ -1.4
SKP1-210ENST00000522855 FANCLQ9NW38 375 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 TMEM260Q9NX78 707 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 APEX2Q9UBZ4 518 aa6.29□□□□□ -1.4
SKP1-210ENST00000522855 DIS3Q9Y2L1 958 aaKnown RBP6.29□□□□□ -1.4
SKP1-210ENST00000522855 SF3B6Q9Y3B4 125 aaKnown RBP6.29□□□□□ -1.4
SKP1-210ENST00000522855 PTCH2Q9Y6C5 1203 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms