RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 SNTG2Q9NY99 539 aa7.97□□□□□ -1.13
CTNNA1-225ENST00000520865 AMPD1P23109 780 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 CD68P34810 354 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 DDIT3P35638 169 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 SNRPNP63162 240 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 KLHL40Q2TBA0 621 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 BRINP3Q76B58 766 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 SMC5Q8IY18 1101 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 CHMP4AQ9BY43 222 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 DIAPH3Q9NSV4 1193 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 LRRC4BQ9NT99 713 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 REV1Q9UBZ9 1251 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 MSRB2Q9Y3D2 182 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 MRPL42Q9Y6G3 142 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 UNC13BO14795 1591 aa7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 CHD2O14647 1828 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 COL16A1Q07092 1604 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-225ENST00000520865 PTPRUQ92729 1446 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 MEIS3P2A8K0S8 358 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 B2RBV5 119 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 DLL1O00548 723 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 AOC2O75106 756 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 ACRP10323 421 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 RXRBP28702 533 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 NTF4P34130 210 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 KIAA2012Q0VF49 1180 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 ZYXQ15942 572 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 LINC00114Q6XXX2 140 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 DDX17Q92841 729 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 MKL1Q969V6 931 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 KANSL2Q9H9L4 492 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 PRDM10Q9NQV6 1147 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 SIRPGQ9P1W8 387 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 SNCAIPQ9Y6H5 919 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 E9PCH4 1651 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 PIK3R4Q99570 1358 aa7.95□□□□□ -1.14
CTNNA1-225ENST00000520865 TRPM2O94759 1503 aa7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 A0A0A0MRY4 1105 aa7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 A0A1W2PQH9 124 aa7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 DDR2Q16832 855 aa7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 ZNF771Q7L3S4 317 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 UBE3DQ7Z6J8 389 aa7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 HSCBQ8IWL3 235 aa7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 FMR1NBQ8N0W7 255 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 DEPDC7Q96QD5 511 aa7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 TRIM55Q9BYV6 548 aa7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 ACTR10Q9NZ32 417 aa7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 HIF3AQ9Y2N7 669 aa7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-225ENST00000520865 DIP2AQ14689 1571 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 PRAMEF27A3QJZ7 478 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 CCDC85CA6NKD9 419 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 SLC22A31A6NKX4 558 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 UPK3BL1B0FP48 263 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 UPK3BL2E5RIL1 263 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 FAM229AH3BQW9 127 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 TMPRSS2O15393 492 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 GRK4P32298 578 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 CASP7P55210 303 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 RAB3GAP1Q15042 981 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 TNNI3KQ59H18 835 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 PPM1JQ5JR12 505 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 OVOS1Q6IE37 1185 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 SDE2Q6IQ49 451 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 HDXQ7Z353 690 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 FBXO11Q86XK2 927 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 SRPK1Q96SB4 655 aaKnown RBP7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 CGNQ9P2M7 1197 aaKnown RBP7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 AFF2P51816 1311 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 RAD50Q92878 1312 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 NPC1L1Q9UHC9 1359 aa7.93□□□□□ -1.14
CTNNA1-225ENST00000520865 AHDC1Q5TGY3 1603 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 CHURC1-FNTBB4DL54 471 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 RBAK-RBAKDNI3L0D1 243 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 ARHGEF15O94989 841 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 TPM3P06753 285 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 IMPDH2P12268 514 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 CHAF1AQ13111 956 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 TRAPPC3LQ5T215 181 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 TTC6Q86TZ1 520 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 GAS2L3Q86XJ1 694 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 OR6P1Q8NGX9 317 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 TMEM40Q8WWA1 233 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 ELMO3Q96BJ8 720 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 ZNF775Q96BV0 537 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 ACSF2Q96CM8 615 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 ATG4CQ96DT6 458 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 RNPC3Q96LT9 517 aaKnown RBP7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 TMPRSS13Q9BYE2 586 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 HDAC5Q9UQL6 1122 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 LTBP3Q9NS15 1303 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 METP08581 1390 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 IQGAP3Q86VI3 1631 aa7.92□□□□□ -1.14
CTNNA1-225ENST00000520865 WFS1O76024 890 aa7.91□□□□□ -1.14
CTNNA1-225ENST00000520865 PLCG1P19174 1290 aa7.91□□□□□ -1.14
CTNNA1-225ENST00000520865 KCNJ4P48050 445 aa7.91□□□□□ -1.14
CTNNA1-225ENST00000520865 CBX1P83916 185 aa7.91□□□□□ -1.14
CTNNA1-225ENST00000520865 TCEAL1Q15170 157 aa7.91□□□□□ -1.14
CTNNA1-225ENST00000520865 NFE2L2Q16236 605 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms