RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 SEC23AQ15436 765 aa19.12■□□□□ 0.65
TNPO1-212ENST00000520850 GPATCH4Q5T3I0 446 aaKnown RBP19.12■□□□□ 0.65
TNPO1-212ENST00000520850 CREB3L3Q68CJ9 461 aa19.12■□□□□ 0.65
TNPO1-212ENST00000520850 RALYLQ86SE5 291 aaKnown RBP19.12■□□□□ 0.65
TNPO1-212ENST00000520850 TEX13BQ9BXU2 312 aa19.12■□□□□ 0.65
TNPO1-212ENST00000520850 CENPFP49454 3210 aa19.12■□□□□ 0.65
TNPO1-212ENST00000520850 TNKSO95271 1327 aa19.11■□□□□ 0.65
TNPO1-212ENST00000520850 CCDC85CA6NKD9 419 aa19.11■□□□□ 0.65
TNPO1-212ENST00000520850 ADCY3O60266 1144 aa19.11■□□□□ 0.65
TNPO1-212ENST00000520850 ERCC3P19447 782 aa19.11■□□□□ 0.65
TNPO1-212ENST00000520850 RGS2P41220 211 aa19.11■□□□□ 0.65
TNPO1-212ENST00000520850 RGS19P49795 217 aa19.11■□□□□ 0.65
TNPO1-212ENST00000520850 ZKSCAN3Q9BRR0 538 aa19.11■□□□□ 0.65
TNPO1-212ENST00000520850 PNMA2Q9UL42 364 aa19.11■□□□□ 0.65
TNPO1-212ENST00000520850 IVNS1ABPQ9Y6Y0 642 aa19.11■□□□□ 0.65
TNPO1-212ENST00000520850 REC8O95072 547 aa19.1■□□□□ 0.65
TNPO1-212ENST00000520850 MAP2K5Q13163 448 aa19.1■□□□□ 0.65
TNPO1-212ENST00000520850 SART3Q15020 963 aaKnown RBP19.1■□□□□ 0.65
TNPO1-212ENST00000520850 STOX1Q6ZVD7 989 aa19.1■□□□□ 0.65
TNPO1-212ENST00000520850 CYB5R4Q7L1T6 521 aa19.1■□□□□ 0.65
TNPO1-212ENST00000520850 MB21D2Q8IYB1 491 aaPredicted RBP19.1■□□□□ 0.65
TNPO1-212ENST00000520850 TMTC2Q8N394 836 aa19.1■□□□□ 0.65
TNPO1-212ENST00000520850 PNMA1Q8ND90 353 aa19.1■□□□□ 0.65
TNPO1-212ENST00000520850 KCNB2Q92953 911 aa19.1■□□□□ 0.65
TNPO1-212ENST00000520850 KIFC2Q96AC6 838 aa19.1■□□□□ 0.65
TNPO1-212ENST00000520850 KAT14Q9H8E8 782 aa19.1■□□□□ 0.65
TNPO1-212ENST00000520850 PLXNB2O15031 1838 aa19.09■□□□□ 0.65
TNPO1-212ENST00000520850 ERICH2A1L162 156 aa19.09■□□□□ 0.65
TNPO1-212ENST00000520850 UBXN2AP68543 259 aa19.09■□□□□ 0.65
TNPO1-212ENST00000520850 ZNF543Q08ER8 600 aa19.09■□□□□ 0.65
TNPO1-212ENST00000520850 IFIT1BQ5T764 474 aaKnown RBP19.09■□□□□ 0.65
TNPO1-212ENST00000520850 KCTD1Q719H9 257 aa19.09■□□□□ 0.65
TNPO1-212ENST00000520850 IGDCC4Q8TDY8 1250 aa19.09■□□□□ 0.65
TNPO1-212ENST00000520850 CWC22Q9HCG8 908 aaKnown RBP19.09■□□□□ 0.65
TNPO1-212ENST00000520850 TAF6LQ9Y6J9 622 aa19.09■□□□□ 0.65
TNPO1-212ENST00000520850 ECM2O94769 699 aaPredicted RBP19.08■□□□□ 0.64
TNPO1-212ENST00000520850 IGHA2P01877 340 aa19.08■□□□□ 0.64
TNPO1-212ENST00000520850 KRT32Q14532 448 aa19.08■□□□□ 0.64
TNPO1-212ENST00000520850 PLS1Q14651 629 aa19.08■□□□□ 0.64
TNPO1-212ENST00000520850 TKFCQ3LXA3 575 aa19.08■□□□□ 0.64
TNPO1-212ENST00000520850 CHST13Q8NET6 341 aa19.08■□□□□ 0.64
TNPO1-212ENST00000520850 TMEM87BQ96K49 555 aa19.08■□□□□ 0.64
TNPO1-212ENST00000520850 SLC5A4Q9NY91 659 aa19.08■□□□□ 0.64
TNPO1-212ENST00000520850 FBXO40Q9UH90 709 aa19.08■□□□□ 0.64
TNPO1-212ENST00000520850 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.64
TNPO1-212ENST00000520850 DIS3Q9Y2L1 958 aaKnown RBP19.08■□□□□ 0.64
TNPO1-212ENST00000520850 CTDP1Q9Y5B0 961 aaPredicted RBP19.08■□□□□ 0.64
TNPO1-212ENST00000520850 COL11A1P12107 1806 aaPredicted RBP19.07■□□□□ 0.64
TNPO1-212ENST00000520850 WDR19Q8NEZ3 1342 aa19.07■□□□□ 0.64
TNPO1-212ENST00000520850 IFIT3O14879 490 aaKnown RBP19.07■□□□□ 0.64
TNPO1-212ENST00000520850 EIF5BO60841 1220 aaKnown RBP19.07■□□□□ 0.64
TNPO1-212ENST00000520850 FCER1AP12319 257 aa19.07■□□□□ 0.64
TNPO1-212ENST00000520850 ZKSCAN1P17029 563 aaPredicted RBP19.07■□□□□ 0.64
TNPO1-212ENST00000520850 MCM5P33992 734 aa19.07■□□□□ 0.64
TNPO1-212ENST00000520850 ASPRV1Q53RT3 343 aa19.07■□□□□ 0.64
TNPO1-212ENST00000520850 NCAPG2Q86XI2 1143 aa19.07■□□□□ 0.64
TNPO1-212ENST00000520850 SH3TC2Q8TF17 1288 aa19.07■□□□□ 0.64
TNPO1-212ENST00000520850 MAP3K14Q99558 947 aa19.07■□□□□ 0.64
TNPO1-212ENST00000520850 APBA2Q99767 749 aa19.07■□□□□ 0.64
TNPO1-212ENST00000520850 RANBP17Q9H2T7 1088 aaKnown RBP19.07■□□□□ 0.64
TNPO1-212ENST00000520850 ZNF236Q9UL36 1845 aa19.07■□□□□ 0.64
TNPO1-212ENST00000520850 ZNF536O15090 1300 aa19.06■□□□□ 0.64
TNPO1-212ENST00000520850 HMGCRP04035 888 aa19.06■□□□□ 0.64
TNPO1-212ENST00000520850 LIFRP42702 1097 aa19.06■□□□□ 0.64
TNPO1-212ENST00000520850 CCDC96Q2M329 555 aa19.06■□□□□ 0.64
TNPO1-212ENST00000520850 SYDE2Q5VT97 1194 aa19.06■□□□□ 0.64
TNPO1-212ENST00000520850 TMEM106CQ9BVX2 250 aa19.06■□□□□ 0.64
TNPO1-212ENST00000520850 MAF1Q9H063 256 aa19.06■□□□□ 0.64
TNPO1-212ENST00000520850 HMGB1P09429 215 aaKnown RBP19.05■□□□□ 0.64
TNPO1-212ENST00000520850 CYP2B6P20813 491 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 ADORA2AP29274 412 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 HSPA4P34932 840 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 ANTXR2P58335 489 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 IKQ13123 557 aaPredicted RBP19.05■□□□□ 0.64
TNPO1-212ENST00000520850 WTAPQ15007 396 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 MAP3K21Q5TCX8 1036 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 WDR78Q5VTH9 848 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 OLFML2BQ68BL8 750 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 SNRNP48Q6IEG0 339 aaKnown RBP19.05■□□□□ 0.64
TNPO1-212ENST00000520850 TTBK2Q6IQ55 1244 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 SAMD1Q6SPF0 538 aaPredicted RBP19.05■□□□□ 0.64
TNPO1-212ENST00000520850 NEK1Q96PY6 1258 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 RIPK3Q9Y572 518 aa19.05■□□□□ 0.64
TNPO1-212ENST00000520850 ICAM1P05362 532 aa19.04■□□□□ 0.64
TNPO1-212ENST00000520850 PARP1P09874 1014 aaKnown RBP19.04■□□□□ 0.64
TNPO1-212ENST00000520850 TROAPQ12815 778 aa19.04■□□□□ 0.64
TNPO1-212ENST00000520850 KCTD2Q14681 263 aa19.04■□□□□ 0.64
TNPO1-212ENST00000520850 DPP9Q86TI2 863 aa19.04■□□□□ 0.64
TNPO1-212ENST00000520850 CPXCR1Q8N123 301 aa19.04■□□□□ 0.64
TNPO1-212ENST00000520850 RAVER2Q9HCJ3 691 aaKnown RBP19.04■□□□□ 0.64
TNPO1-212ENST00000520850 BIN2Q9UBW5 565 aaPredicted RBP19.04■□□□□ 0.64
TNPO1-212ENST00000520850 RPTORQ8N122 1335 aa19.03■□□□□ 0.64
TNPO1-212ENST00000520850 PALM3A6NDB9 673 aaPredicted RBP19.03■□□□□ 0.64
TNPO1-212ENST00000520850 INHAP05111 366 aa19.03■□□□□ 0.64
TNPO1-212ENST00000520850 GJB1P08034 283 aa19.03■□□□□ 0.64
TNPO1-212ENST00000520850 ELNP15502 786 aa19.03■□□□□ 0.64
TNPO1-212ENST00000520850 EXOSC10Q01780 885 aaKnown RBP19.03■□□□□ 0.64
TNPO1-212ENST00000520850 TMEM67Q5HYA8 995 aa19.03■□□□□ 0.64
TNPO1-212ENST00000520850 RASEFQ8IZ41 740 aa19.03■□□□□ 0.64
TNPO1-212ENST00000520850 MSL3Q8N5Y2 521 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms