RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 ZSCAN22P10073 491 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-208ENST00000520561 SLC16A2P36021 539 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 SAFBQ15424 915 aaKnown RBP eCLIP10.34□□□□□ -0.75
CSMD1-208ENST00000520561 CDC37Q16543 378 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-208ENST00000520561 SH3D19Q5HYK7 790 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 KIAA1755Q5JYT7 1200 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 BTNL9Q6UXG8 535 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 HEATR3Q7Z4Q2 680 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 ADGRF4Q8IZF3 695 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 CCDC148Q8NFR7 591 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 OPTNQ96CV9 577 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 SLC10A4Q96EP9 437 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 CPVLQ9H3G5 476 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 VAT1LQ9HCJ6 419 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 BRMS1Q9HCU9 246 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 MTMR6Q9Y217 621 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 PLA2G6O60733 806 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 FLOT1O75955 427 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 F13A1P00488 732 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 GUCY1B3Q02153 619 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 GNL2Q13823 731 aaKnown RBP10.33□□□□□ -0.76
CSMD1-208ENST00000520561 PKP1Q13835 747 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 PKN1Q16512 942 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 SLC35G1Q2M3R5 365 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 FOXD4L5Q5VV16 416 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-208ENST00000520561 KRT40Q6A162 431 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 SAMD1Q6SPF0 538 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-208ENST00000520561 FAM177A1Q8N128 213 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-208ENST00000520561 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-208ENST00000520561 CCDC12Q8WUD4 166 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-208ENST00000520561 CNKSR2Q8WXI2 1034 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 FOXD4L4Q8WXT5 416 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-208ENST00000520561 KIFC2Q96AC6 838 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 AIFM3Q96NN9 605 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 PIGSQ96S52 555 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 SLF1Q9BQI6 1058 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 RPAP3Q9H6T3 665 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-208ENST00000520561 JMJD4Q9H9V9 463 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 VPS54Q9P1Q0 977 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 KCNH4Q9UQ05 1017 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 ATP6V1DQ9Y5K8 247 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 PTPRFP10586 1907 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 PASKQ96RG2 1323 aa10.33□□□□□ -0.76
CSMD1-208ENST00000520561 A0A0G2JLL6 359 aaPredicted RBP10.32□□□□□ -0.76
CSMD1-208ENST00000520561 PNMA6FA0A0J9YX94 578 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 IRF6O14896 467 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 ZBTB5O15062 677 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 TOMM70O94826 608 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 CALML3P27482 149 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 NAPAP54920 295 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 HUNKP57058 714 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 TRAF1Q13077 416 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 SNAPC2Q13487 334 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 DGKZQ13574 1117 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 WWC2Q6AWC2 1192 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 MCTP1Q6DN14 999 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 PPP1R18Q6NYC8 613 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 GADL1Q6ZQY3 521 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 PRRT2Q7Z6L0 340 aaPredicted RBP10.32□□□□□ -0.76
CSMD1-208ENST00000520561 FBXO18Q8NFZ0 1043 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 GPKOWQ92917 476 aaPredicted RBP eCLIP10.32□□□□□ -0.76
CSMD1-208ENST00000520561 MTMR8Q96EF0 704 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 WNK4Q96J92 1243 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 SH3GLB2Q9NR46 395 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 BARHL2Q9NY43 387 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 PRR12Q9ULL5 1215 aa10.32□□□□□ -0.76
CSMD1-208ENST00000520561 CTDP1Q9Y5B0 961 aaPredicted RBP10.32□□□□□ -0.76
CSMD1-208ENST00000520561 USP17L15C9J2P7 530 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 USP17L13C9JLJ4 530 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 USP17L11C9JVI0 530 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 USP17L18D6R9N7 530 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 USP17L22D6RA61 530 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 USP17L17D6RBQ6 530 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 USP17L19D6RCP7 530 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 USP17L20D6RJB6 530 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 MMP1P03956 469 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 FDX1P10109 184 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 KRT2P35908 639 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 NLRP5P59047 1200 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 USP17L24Q0WX57 530 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 FSTL1Q12841 308 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 PABPC4Q13310 644 aaKnown RBP eCLIP10.31□□□□□ -0.76
CSMD1-208ENST00000520561 QRICH1Q2TAL8 776 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 CST9Q5W186 159 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 OTUD7BQ6GQQ9 843 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 FASTKD5Q7L8L6 764 aaKnown RBP10.31□□□□□ -0.76
CSMD1-208ENST00000520561 FERMT3Q86UX7 667 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 PRPF38AQ8NAV1 312 aaKnown RBP10.31□□□□□ -0.76
CSMD1-208ENST00000520561 PHF20Q9BVI0 1012 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 AMNQ9BXJ7 453 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 RANBP17Q9H2T7 1088 aaKnown RBP10.31□□□□□ -0.76
CSMD1-208ENST00000520561 ZSCAN16Q9H4T2 348 aaPredicted RBP10.31□□□□□ -0.76
CSMD1-208ENST00000520561 FBXO28Q9NVF7 368 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 PPP1R9AQ9ULJ8 1098 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 MYPNQ86TC9 1320 aa10.31□□□□□ -0.76
CSMD1-208ENST00000520561 STXBP3O00186 592 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 ZBTB48P10074 688 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-208ENST00000520561 ADCY7P51828 1080 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 GTF2A2P52657 109 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms