RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GTF2IRD2BQ6EKJ0 949 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 C22orf34Q6ZV56 151 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 GTF2IRD2Q86UP8 949 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 FIBCD1Q8N539 461 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 BTN2A2Q8WVV5 523 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 KCTD13Q8WZ19 329 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 CLUHP3Q96NS8 147 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 LGR4Q9BXB1 951 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 NKX2-4Q9H2Z4 354 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 KCNH3Q9ULD8 1083 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 TPX2Q9ULW0 747 aaKnown RBP7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 GSG1L2A8MUP6 293 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 SIGLEC6O43699 453 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 DLX3O60479 287 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 KCNH1O95259 989 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 C6orf222P0C671 652 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 COL8A1P27658 744 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 CNGA1P29973 690 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 GFRA1P56159 465 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 RNF180Q86T96 592 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 TXNRD3Q86VQ6 643 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 GSTCDQ8NEC7 633 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 NOL6Q9H6R4 1146 aaKnown RBP7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 LGR6Q9HBX8 967 aa7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 PRDM5Q9NQX1 630 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P46-201ENST00000520062 CPP00450 1065 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 SFRP5Q5T4F7 317 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 DTWD2Q8NBA8 298 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 ENOX1Q8TC92 643 aaKnown RBP7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 BRF1Q92994 677 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 MEGF10Q96KG7 1140 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 TRIM39Q9HCM9 518 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 CYP26B1Q9NR63 512 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 GFOD1Q9NXC2 390 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 GTF2IRD1Q9UHL9 959 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 ATP8A1Q9Y2Q0 1164 aa7.41□□□□□ -1.22
HMGB1P46-201ENST00000520062 DHX15O43143 795 aaKnown RBP7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 ITIH2P19823 946 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 AMPD2Q01433 879 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 SNW1Q13573 536 aaKnown RBP7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 PLEKHG6Q3KR16 790 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 CT47A1Q5JQC4 288 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 BEND4Q6ZU67 534 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 FAM214BQ7L5A3 538 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 MAMDC2Q7Z304 686 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 LRRTM3Q86VH5 581 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 CLEC10AQ8IUN9 316 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 PPM1KQ8N3J5 372 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 PIWIL2Q8TC59 973 aaKnown RBP7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 STAG1Q8WVM7 1258 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 PTPRN2Q92932 1015 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 DSCC1Q9BVC3 393 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 IRF2BPLQ9H1B7 796 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 ASCC2Q9H1I8 757 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 CHST7Q9NS84 486 aa7.4□□□□□ -1.22
HMGB1P46-201ENST00000520062 IGF2BP3O00425 579 aaKnown RBP eCLIP7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 LRRN2O75325 713 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 NPTXRO95502 500 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 SNRPB2P08579 225 aaKnown RBP7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 PDGFRBP09619 1106 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 FAM87AP0C7U9 286 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 ZNF865P0CJ78 1059 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 POU3F3P20264 500 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 POU3F2P20265 443 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 NMIQ13287 307 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 PPP2R5DQ14738 602 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 NFKBIBQ15653 356 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 SLC35F1Q5T1Q4 408 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 C1orf159Q96HA4 380 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 Q96M66 194 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 FAM83CQ9BQN1 747 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 TARS2Q9BW92 718 aaKnown RBP7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 KCNF1Q9H3M0 494 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 SLC52A2Q9HAB3 445 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 MCM8Q9UJA3 840 aa7.39□□□□□ -1.23
HMGB1P46-201ENST00000520062 LEFTY1O75610 366 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 DNAJC8O75937 253 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 PRAMEF1O95521 474 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 ASLP04424 464 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 GSNP06396 782 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 SDSP20132 328 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 PMLP29590 882 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 POU4F1Q01851 419 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 TMC3Q7Z5M5 1100 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 AHI1Q8N157 1196 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 PRPF38AQ8NAV1 312 aaKnown RBP7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 TMEM145Q8NBT3 493 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 SLC7A14Q8TBB6 771 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 DDX1Q92499 740 aaKnown RBP7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 ZDHHC15Q96MV8 337 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 SSBP4Q9BWG4 385 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 HOMER2Q9NSB8 354 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 KLHL42Q9P2K6 505 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 NDOR1Q9UHB4 597 aa7.38□□□□□ -1.23
HMGB1P46-201ENST00000520062 CNTNAP4Q9C0A0 1308 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 MARCH6O60337 910 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 KCNJ6P48051 423 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 NFKB2Q00653 900 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms