RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 DSCC1Q9BVC3 393 aa9.48□□□□□ -0.89
PTPN12-213ENST00000519553 LMCD1Q9NZU5 365 aa9.48□□□□□ -0.89
PTPN12-213ENST00000519553 USP35Q9P2H5 1018 aa9.48□□□□□ -0.89
PTPN12-213ENST00000519553 CGGBP1Q9UFW8 167 aaPredicted RBP9.48□□□□□ -0.89
PTPN12-213ENST00000519553 PPM1BO75688 479 aa9.47□□□□□ -0.89
PTPN12-213ENST00000519553 LTKP29376 864 aa9.47□□□□□ -0.89
PTPN12-213ENST00000519553 ZP2Q05996 745 aa9.47□□□□□ -0.89
PTPN12-213ENST00000519553 ADAT2Q7Z6V5 191 aaKnown RBP9.47□□□□□ -0.89
PTPN12-213ENST00000519553 ARHGEF39Q8N4T4 335 aa9.47□□□□□ -0.89
PTPN12-213ENST00000519553 RCC1LQ96I51 464 aaKnown RBP9.47□□□□□ -0.89
PTPN12-213ENST00000519553 LNPKQ9C0E8 428 aa9.47□□□□□ -0.89
PTPN12-213ENST00000519553 OSBPL2Q9H1P3 480 aa9.47□□□□□ -0.89
PTPN12-213ENST00000519553 NAT2P11245 290 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 BMP8BP34820 402 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 TEKQ02763 1124 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 EGR3Q06889 387 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 Q8N3U1 123 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 LINC00116Q8NCU8 138 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 APBA2Q99767 749 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 LGR4Q9BXB1 951 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 FOXP3Q9BZS1 431 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 CCDC113Q9H0I3 377 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 PRDM7Q9NQW5 492 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 ADAMTS6Q9UKP5 1117 aa9.46□□□□□ -0.9
PTPN12-213ENST00000519553 GSNP06396 782 aa9.45□□□□□ -0.9
PTPN12-213ENST00000519553 RNF111Q6ZNA4 994 aa9.45□□□□□ -0.9
PTPN12-213ENST00000519553 TP53INP2Q8IXH6 220 aa9.45□□□□□ -0.9
PTPN12-213ENST00000519553 EPN3Q9H201 632 aa9.45□□□□□ -0.9
PTPN12-213ENST00000519553 SNTG2Q9NY99 539 aa9.45□□□□□ -0.9
PTPN12-213ENST00000519553 TCFL5Q9UL49 500 aa9.45□□□□□ -0.9
PTPN12-213ENST00000519553 DIS3Q9Y2L1 958 aaKnown RBP9.45□□□□□ -0.9
PTPN12-213ENST00000519553 ZNF281Q9Y2X9 895 aa9.45□□□□□ -0.9
PTPN12-213ENST00000519553 TMEM82A0PJX8 343 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 FAM221BA6H8Z2 402 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 CCDC85CA6NKD9 419 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 PDPK1O15530 556 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 IGSF3O75054 1194 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 ZNF205O95201 554 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 SYPP08247 313 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 GP2P55259 537 aaKnown RBP9.44□□□□□ -0.9
PTPN12-213ENST00000519553 PCBP3P57721 371 aaKnown RBP9.44□□□□□ -0.9
PTPN12-213ENST00000519553 RASGRF1Q13972 1273 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 PPP2R5DQ14738 602 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 AGBL5Q8NDL9 886 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 BVESQ8NE79 360 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 ST13P5Q8NFI4 369 aaPredicted RBP9.44□□□□□ -0.9
PTPN12-213ENST00000519553 MKL1Q969V6 931 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 ZDHHC15Q96MV8 337 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 DEPDC7Q96QD5 511 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 SUGT1Q9Y2Z0 365 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 SF3B6Q9Y3B4 125 aaKnown RBP9.44□□□□□ -0.9
PTPN12-213ENST00000519553 EMC9Q9Y3B6 208 aa9.44□□□□□ -0.9
PTPN12-213ENST00000519553 PLCL1Q15111 1095 aa9.43□□□□□ -0.9
PTPN12-213ENST00000519553 SLC23A3Q6PIS1 610 aa9.43□□□□□ -0.9
PTPN12-213ENST00000519553 LRP10Q7Z4F1 713 aa9.43□□□□□ -0.9
PTPN12-213ENST00000519553 ZNF227Q86WZ6 799 aa9.43□□□□□ -0.9
PTPN12-213ENST00000519553 ABI1Q8IZP0 508 aa9.43□□□□□ -0.9
PTPN12-213ENST00000519553 MRGPRX3Q96LB0 322 aa9.43□□□□□ -0.9
PTPN12-213ENST00000519553 SLC12A9Q9BXP2 914 aa9.43□□□□□ -0.9
PTPN12-213ENST00000519553 MBNL3Q9NUK0 354 aaKnown RBP9.43□□□□□ -0.9
PTPN12-213ENST00000519553 TBX1O43435 398 aa9.42□□□□□ -0.9
PTPN12-213ENST00000519553 ITGAVP06756 1048 aa9.42□□□□□ -0.9
PTPN12-213ENST00000519553 VAV1P15498 845 aa9.42□□□□□ -0.9
PTPN12-213ENST00000519553 GRB10Q13322 594 aa9.42□□□□□ -0.9
PTPN12-213ENST00000519553 SV2CQ496J9 727 aa9.42□□□□□ -0.9
PTPN12-213ENST00000519553 RTP2Q5QGT7 225 aa9.42□□□□□ -0.9
PTPN12-213ENST00000519553 DPH6Q7L8W6 267 aa9.42□□□□□ -0.9
PTPN12-213ENST00000519553 MCMBPQ9BTE3 642 aa9.42□□□□□ -0.9
PTPN12-213ENST00000519553 AKT3Q9Y243 479 aa9.42□□□□□ -0.9
PTPN12-213ENST00000519553 OAS3Q9Y6K5 1087 aaKnown RBP9.42□□□□□ -0.9
PTPN12-213ENST00000519553 DNAJC25-GNG10A0A024R161 153 aa9.41□□□□□ -0.9
PTPN12-213ENST00000519553 FKTNO75072 461 aa9.41□□□□□ -0.9
PTPN12-213ENST00000519553 RNASE1P07998 156 aaKnown RBP9.41□□□□□ -0.9
PTPN12-213ENST00000519553 CCDC144BQ3MJ40 725 aa9.41□□□□□ -0.9
PTPN12-213ENST00000519553 RALGPS1Q5JS13 557 aa9.41□□□□□ -0.9
PTPN12-213ENST00000519553 CWF19L1Q69YN2 538 aaKnown RBP9.41□□□□□ -0.9
PTPN12-213ENST00000519553 SPATC1Q76KD6 591 aa9.41□□□□□ -0.9
PTPN12-213ENST00000519553 TRIM59Q8IWR1 403 aa9.41□□□□□ -0.9
PTPN12-213ENST00000519553 LRRN4CLQ8ND94 238 aa9.41□□□□□ -0.9
PTPN12-213ENST00000519553 ALPK1Q96QP1 1244 aa9.41□□□□□ -0.9
PTPN12-213ENST00000519553 SRPK1Q96SB4 655 aaKnown RBP9.41□□□□□ -0.9
PTPN12-213ENST00000519553 CAPNS1P04632 268 aa9.4□□□□□ -0.9
PTPN12-213ENST00000519553 BMS1Q14692 1282 aaKnown RBP9.4□□□□□ -0.9
PTPN12-213ENST00000519553 ZNF792Q3KQV3 632 aa9.4□□□□□ -0.9
PTPN12-213ENST00000519553 ZPBP2Q6X784 338 aa9.4□□□□□ -0.9
PTPN12-213ENST00000519553 PPP1R14AQ96A00 147 aa9.4□□□□□ -0.9
PTPN12-213ENST00000519553 ZNF669Q96BR6 464 aaPredicted RBP9.4□□□□□ -0.9
PTPN12-213ENST00000519553 FCRL3Q96P31 734 aaPredicted RBP9.4□□□□□ -0.9
PTPN12-213ENST00000519553 G6PC3Q9BUM1 346 aa9.4□□□□□ -0.9
PTPN12-213ENST00000519553 C19orf73Q9NVV2 129 aa9.4□□□□□ -0.9
PTPN12-213ENST00000519553 SLAMF8Q9P0V8 285 aa9.4□□□□□ -0.9
PTPN12-213ENST00000519553 CDK11AQ9UQ88 783 aaPredicted RBP9.4□□□□□ -0.9
PTPN12-213ENST00000519553 A0A1W2PQU0 124 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 VAMP4O75379 141 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 KCNH1O95259 989 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 CD3EP07766 207 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 IFNGR1P15260 489 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 POU4F1Q01851 419 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 MTERF2Q49AM1 385 aa9.39□□□□□ -0.91
PTPN12-213ENST00000519553 POMZP3Q6PJE2 187 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms