RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 RALBP1Q15311 655 aa7.7□□□□□ -1.18
PABPC1-207ENST00000518716 MTFR1Q15390 333 aa7.7□□□□□ -1.18
PABPC1-207ENST00000518716 TAF1CQ15572 869 aaPredicted RBP7.7□□□□□ -1.18
PABPC1-207ENST00000518716 CCL15Q16663 113 aa7.7□□□□□ -1.18
PABPC1-207ENST00000518716 SLC4A8Q2Y0W8 1093 aa7.7□□□□□ -1.18
PABPC1-207ENST00000518716 C17orf99Q6UX52 265 aa7.7□□□□□ -1.18
PABPC1-207ENST00000518716 SLC17A8Q8NDX2 589 aa7.7□□□□□ -1.18
PABPC1-207ENST00000518716 TP53INP1Q96A56 240 aa7.7□□□□□ -1.18
PABPC1-207ENST00000518716 SSBP4Q9BWG4 385 aaPredicted RBP7.7□□□□□ -1.18
PABPC1-207ENST00000518716 ZCCHC17Q9NP64 241 aaKnown RBP7.7□□□□□ -1.18
PABPC1-207ENST00000518716 IFT57Q9NWB7 429 aa7.7□□□□□ -1.18
PABPC1-207ENST00000518716 ZSWIM8A7E2V4 1837 aa7.7□□□□□ -1.18
PABPC1-207ENST00000518716 FAM205AQ6ZU69 1335 aa7.7□□□□□ -1.18
PABPC1-207ENST00000518716 SPEF2Q9C093 1822 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 TTC28Q96AY4 2481 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 A0A1W2PPC1 479 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 BTBD19C9JJ37 291 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 ELL2O00472 640 aaPredicted RBP7.69□□□□□ -1.18
PABPC1-207ENST00000518716 SOX1O00570 391 aaPredicted RBP7.69□□□□□ -1.18
PABPC1-207ENST00000518716 ZBTB7BO15156 539 aaPredicted RBP7.69□□□□□ -1.18
PABPC1-207ENST00000518716 MYO1BO43795 1136 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 DDX58O95786 925 aaKnown RBP7.69□□□□□ -1.18
PABPC1-207ENST00000518716 GJB1P08034 283 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 GJA8P48165 433 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 CWF19L2Q2TBE0 894 aaKnown RBP7.69□□□□□ -1.18
PABPC1-207ENST00000518716 TMEM259Q4ZIN3 620 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 TNFRSF25Q93038 417 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 ZNF70Q9UC06 446 aaPredicted RBP7.69□□□□□ -1.18
PABPC1-207ENST00000518716 SERPINA10Q9UK55 444 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 ADGRA2Q96PE1 1338 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 VCANP13611 3396 aa7.69□□□□□ -1.18
PABPC1-207ENST00000518716 PAX4O43316 350 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 TAF5LO75529 589 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 INHAP05111 366 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 GCKRQ14397 625 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 CCDC30Q5VVM6 783 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 SHISA2Q6UWI4 295 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 C20orf204Q6ZNR8 217 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 G2E3Q7L622 706 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 UBE3BQ7Z3V4 1068 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 TSPYL6Q8N831 410 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 TDRD7Q8NHU6 1098 aaKnown RBP7.68□□□□□ -1.18
PABPC1-207ENST00000518716 VEZTQ9HBM0 779 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 ZDHHC3Q9NYG2 299 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 SRRDQ9UH36 339 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 RNF112Q9ULX5 631 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 SNCAIPQ9Y6H5 919 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 USP3Q9Y6I4 520 aa7.68□□□□□ -1.18
PABPC1-207ENST00000518716 F8W031 263 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-207ENST00000518716 CETPP11597 493 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 TXKP42681 527 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 SMTNP53814 917 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 GDF10P55107 478 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 GNAI1P63096 354 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 FOXO4P98177 505 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 USP4Q13107 963 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 MOGSQ13724 837 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 TNFAIP1Q13829 316 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 DZIP1LQ8IYY4 767 aaKnown RBP7.67□□□□□ -1.18
PABPC1-207ENST00000518716 DPF3Q92784 378 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 LENG1Q96BZ8 264 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-207ENST00000518716 MPHOSPH8Q99549 860 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 SLC30A3Q99726 388 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 TMEM39BQ9GZU3 492 aa7.67□□□□□ -1.18
PABPC1-207ENST00000518716 TDRD3Q9H7E2 651 aaKnown RBP7.67□□□□□ -1.18
PABPC1-207ENST00000518716 IQSEC3Q9UPP2 1182 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-207ENST00000518716 SPTBN5Q9NRC6 3674 aaKnown RBP7.67□□□□□ -1.18
PABPC1-207ENST00000518716 A0A0A0MRY4 1105 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 CCL5P13501 91 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 NRG1Q02297 640 aaPredicted RBP7.66□□□□□ -1.18
PABPC1-207ENST00000518716 PPIL2Q13356 520 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 GRIK5Q16478 980 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 ZNF804AQ7Z570 1209 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 ERO1BQ86YB8 467 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 FAM84BQ96KN1 310 aaPredicted RBP7.66□□□□□ -1.18
PABPC1-207ENST00000518716 MRIQ9BWK5 157 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 CHMP4AQ9BY43 222 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 DOLKQ9UPQ8 538 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 KCNH4Q9UQ05 1017 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 JAG2Q9Y219 1238 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 A0A1B0GUL6 1792 aa7.66□□□□□ -1.18
PABPC1-207ENST00000518716 UNC80Q8N2C7 3258 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 ANKRD18BA2A2Z9 1011 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 SGPL1O95470 568 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 GRK4P32298 578 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 BMP8BP34820 402 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 ADH7P40394 386 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 PSMC4P43686 418 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 KCNJ4P48050 445 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 HDLBPQ00341 1268 aaKnown RBP7.65□□□□□ -1.18
PABPC1-207ENST00000518716 NEXNQ0ZGT2 675 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 SNAPC2Q13487 334 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 MFSD14BQ5SR56 506 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 FKBP1CQ5VVH2 108 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 ANKRD23Q86SG2 305 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 PHTF2Q8N3S3 785 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 U2AF1L4Q8WU68 220 aaKnown RBP7.65□□□□□ -1.18
PABPC1-207ENST00000518716 ARAP2Q8WZ64 1704 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 ZKSCAN4Q969J2 545 aaPredicted RBP7.65□□□□□ -1.18
PABPC1-207ENST00000518716 HTATIP2Q9BUP3 242 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms