RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 SPICE1Q8N0Z3 855 aa12.23□□□□□ -0.45
PABPC1-203ENST00000517921 PIBF1Q8WXW3 757 aa12.23□□□□□ -0.45
PABPC1-203ENST00000517921 MTMR8Q96EF0 704 aa12.23□□□□□ -0.45
PABPC1-203ENST00000517921 ZNF408Q9H9D4 720 aa12.23□□□□□ -0.45
PABPC1-203ENST00000517921 AS3MTQ9HBK9 375 aa12.23□□□□□ -0.45
PABPC1-203ENST00000517921 USP17L10C9JJH3 530 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 CELF2O95319 508 aaKnown RBP12.22□□□□□ -0.45
PABPC1-203ENST00000517921 MTMR2Q13614 643 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 FAM83BQ5T0W9 1011 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 BTNL9Q6UXG8 535 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 CLEC17AQ6ZS10 378 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 FERMT3Q86UX7 667 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 ZNF280CQ8ND82 737 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 LPAR1Q92633 364 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 VPS54Q9P1Q0 977 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 ISY1Q9ULR0 285 aaKnown RBP12.22□□□□□ -0.45
PABPC1-203ENST00000517921 CSADQ9Y600 493 aa12.22□□□□□ -0.45
PABPC1-203ENST00000517921 TRIM75PA6NK02 468 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 WDR46O15213 610 aaKnown RBP12.21□□□□□ -0.45
PABPC1-203ENST00000517921 MMP1P03956 469 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 BACE1P56817 501 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 SPP2Q13103 211 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 GRM1Q13255 1194 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 DGKZQ13574 1117 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 TRIM29Q14134 588 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 TTLL12Q14166 644 aaPredicted RBP12.21□□□□□ -0.45
PABPC1-203ENST00000517921 SYDE2Q5VT97 1194 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 WWC2Q6AWC2 1192 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 ARMC9Q7Z3E5 817 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 HOMER1Q86YM7 354 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 ANKRD13AQ8IZ07 590 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 GPKOWQ92917 476 aaPredicted RBP eCLIP12.21□□□□□ -0.45
PABPC1-203ENST00000517921 RRP36Q96EU6 259 aaKnown RBP12.21□□□□□ -0.45
PABPC1-203ENST00000517921 CLMNQ96JQ2 1002 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 PIGSQ96S52 555 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 JMJD4Q9H9V9 463 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 VAT1LQ9HCJ6 419 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 KCNJ14Q9UNX9 436 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 ZHX2Q9Y6X8 837 aa12.21□□□□□ -0.45
PABPC1-203ENST00000517921 KIF28PB7ZC32 967 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 TMEM232C9JQI7 657 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 STXBP3O00186 592 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 PLA2G6O60733 806 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 BAG4O95429 457 aaKnown RBP12.2□□□□□ -0.46
PABPC1-203ENST00000517921 XBP1P17861 261 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 VCAM1P19320 739 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 STAT2P52630 851 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 USP14P54578 494 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 KIF23Q02241 960 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-203ENST00000517921 NPY5RQ15761 445 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 CST9Q5W186 159 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 TYW1BQ6NUM6 668 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 CHAMP1Q96JM3 812 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 C12orf42Q96LP6 360 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 PHF20Q9BVI0 1012 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 ELP3Q9H9T3 547 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 SH3GLB2Q9NR46 395 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 EMILIN3Q9NT22 766 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 BARHL2Q9NY43 387 aa12.2□□□□□ -0.46
PABPC1-203ENST00000517921 SEC63Q9UGP8 760 aaKnown RBP12.2□□□□□ -0.46
PABPC1-203ENST00000517921 LCTP09848 1927 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 PNMA6FA0A0J9YX94 578 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 SPDYE5A6NIY4 337 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 hCG_1984214I3L0E3 225 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 ZBTB5O15062 677 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 PPP1R11O60927 126 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-203ENST00000517921 HMGCS2P54868 508 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 CDC37Q16543 378 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-203ENST00000517921 FOXD4L6Q3SYB3 417 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-203ENST00000517921 LDLRAD1Q5T700 205 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 MCTP1Q6DN14 999 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 FOXD4L3Q6VB84 417 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-203ENST00000517921 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 FAM160B2Q86V87 743 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 ERO1BQ86YB8 467 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 FAM177A1Q8N128 213 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-203ENST00000517921 ZNF713Q8N859 430 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-203ENST00000517921 GBP4Q96PP9 640 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 ZSCAN16Q9H4T2 348 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-203ENST00000517921 FEM1BQ9UK73 627 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 PRR12Q9ULL5 1215 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 ATP6V1DQ9Y5K8 247 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 TLL2Q9Y6L7 1015 aa12.19□□□□□ -0.46
PABPC1-203ENST00000517921 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
PABPC1-203ENST00000517921 C19orf81C9J6K1 198 aa12.18□□□□□ -0.46
PABPC1-203ENST00000517921 U2AF2P26368 475 aaKnown RBP eCLIP12.18□□□□□ -0.46
PABPC1-203ENST00000517921 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-203ENST00000517921 FKBP1BP68106 108 aa12.18□□□□□ -0.46
PABPC1-203ENST00000517921 PPATQ06203 517 aa12.18□□□□□ -0.46
PABPC1-203ENST00000517921 IKQ13123 557 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-203ENST00000517921 QRICH1Q2TAL8 776 aa12.18□□□□□ -0.46
PABPC1-203ENST00000517921 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
PABPC1-203ENST00000517921 COL13A1Q5TAT6 717 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-203ENST00000517921 CYP4F22Q6NT55 531 aa12.18□□□□□ -0.46
PABPC1-203ENST00000517921 FAM173BQ6P4H8 233 aa12.18□□□□□ -0.46
PABPC1-203ENST00000517921 BRAPQ7Z569 592 aa12.18□□□□□ -0.46
PABPC1-203ENST00000517921 DIS3L2Q8IYB7 885 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms