RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.28□□□□□ -0.12
SMAD1-215ENST00000515385 PIK3C2AO00443 1686 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 TTC26A0AVF1 554 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 H7C1D1 291 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 ZNF185O15231 689 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 RNMTO43148 476 aaKnown RBP14.27□□□□□ -0.12
SMAD1-215ENST00000515385 USO1O60763 962 aaKnown RBP14.27□□□□□ -0.12
SMAD1-215ENST00000515385 FMNL1O95466 1100 aaPredicted RBP14.27□□□□□ -0.12
SMAD1-215ENST00000515385 BMP15O95972 392 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 PDHBP11177 359 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 CDC25AP30304 524 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 CDK17Q00537 523 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 GRIN1Q05586 938 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 ADCY2Q08462 1091 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 AIMP1Q12904 312 aaKnown RBP14.27□□□□□ -0.12
SMAD1-215ENST00000515385 PAK1Q13153 545 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 NAA25Q14CX7 972 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 ANKRD20A8PQ5CZ79 823 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 CRELD2Q6UXH1 353 aaPredicted RBP14.27□□□□□ -0.12
SMAD1-215ENST00000515385 NGDNQ8NEJ9 315 aaKnown RBP14.27□□□□□ -0.12
SMAD1-215ENST00000515385 CCHCR1Q8TD31 782 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 TATDN2Q93075 761 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 NEUROD6Q96NK8 337 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 SCLT1Q96NL6 688 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 CSRNP2Q9H175 543 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 NUCKS1Q9H1E3 243 aaKnown RBP14.27□□□□□ -0.12
SMAD1-215ENST00000515385 SLC24A3Q9HC58 644 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 TAB2Q9NYJ8 693 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 UBN2Q6ZU65 1347 aa14.27□□□□□ -0.12
SMAD1-215ENST00000515385 GMNCA6NCL1 334 aa14.27□□□□□ -0.13
SMAD1-215ENST00000515385 E7EVH7 732 aa14.27□□□□□ -0.13
SMAD1-215ENST00000515385 AP1ARQ63HQ0 302 aa14.27□□□□□ -0.13
SMAD1-215ENST00000515385 DIS3L2Q8IYB7 885 aaKnown RBP14.27□□□□□ -0.13
SMAD1-215ENST00000515385 SH2D3CQ8N5H7 860 aa14.27□□□□□ -0.13
SMAD1-215ENST00000515385 MB21D1Q8N884 522 aa14.27□□□□□ -0.13
SMAD1-215ENST00000515385 ZNF483Q8TF39 744 aaPredicted RBP14.27□□□□□ -0.13
SMAD1-215ENST00000515385 PHKBQ93100 1093 aa14.27□□□□□ -0.13
SMAD1-215ENST00000515385 HYOU1Q9Y4L1 999 aa14.27□□□□□ -0.13
SMAD1-215ENST00000515385 USP54Q70EL1 1684 aa14.27□□□□□ -0.13
SMAD1-215ENST00000515385 GOLGA8AA7E2F4 631 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 PES1O00541 588 aaKnown RBP14.26□□□□□ -0.13
SMAD1-215ENST00000515385 ARID4AP29374 1257 aaPredicted RBP14.26□□□□□ -0.13
SMAD1-215ENST00000515385 IL15P40933 162 aaPredicted RBP14.26□□□□□ -0.13
SMAD1-215ENST00000515385 ITGB3BPQ13352 177 aaPredicted RBP14.26□□□□□ -0.13
SMAD1-215ENST00000515385 PDIA6Q15084 440 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 CCDC181Q5TID7 509 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 HAUS3Q68CZ6 603 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 C8orf74Q6P047 294 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 ZNF530Q6P9A1 599 aaPredicted RBP14.26□□□□□ -0.13
SMAD1-215ENST00000515385 WDR59Q6PJI9 974 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 LRIG3Q6UXM1 1119 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 SGMS1Q86VZ5 419 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 WHAMMQ8TF30 809 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 LTV1Q96GA3 475 aaPredicted RBP14.26□□□□□ -0.13
SMAD1-215ENST00000515385 CCDC43Q96MW1 224 aaKnown RBP14.26□□□□□ -0.13
SMAD1-215ENST00000515385 MYD88Q99836 296 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 KDM4CQ9H3R0 1056 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 GDF3Q9NR23 364 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 RMND1Q9NWS8 449 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 ETAA1Q9NY74 926 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 NWD2Q9ULI1 1742 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 C5orf60A6NFR6 353 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 GOLGA6L10A6NI86 522 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 ZNF233A6NK53 670 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 LGALS16A8MUM7 142 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 BTBD18B2RXH4 712 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 FOXP2O15409 715 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 AFMP43652 599 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 KCTD16Q68DU8 428 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 HDAC7Q8WUI4 952 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 TCP11Q8WWU5 503 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 APPBP2Q92624 585 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 CCDC47Q96A33 483 aaKnown RBP14.26□□□□□ -0.13
SMAD1-215ENST00000515385 FERMT2Q96AC1 680 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 IQCDQ96DY2 449 aa14.26□□□□□ -0.13
SMAD1-215ENST00000515385 IFNAR1P17181 557 aa14.25□□□□□ -0.13
SMAD1-215ENST00000515385 EEF1GP26641 437 aaKnown RBP14.25□□□□□ -0.13
SMAD1-215ENST00000515385 GCKP35557 465 aa14.25□□□□□ -0.13
SMAD1-215ENST00000515385 RRAGBQ5VZM2 374 aa14.25□□□□□ -0.13
SMAD1-215ENST00000515385 EIF1ADQ8N9N8 165 aaKnown RBP14.25□□□□□ -0.13
SMAD1-215ENST00000515385 RASSF8Q8NHQ8 419 aa14.25□□□□□ -0.13
SMAD1-215ENST00000515385 HAUS2Q9NVX0 235 aa14.25□□□□□ -0.13
SMAD1-215ENST00000515385 TSKSQ9UJT2 592 aa14.25□□□□□ -0.13
SMAD1-215ENST00000515385 ZBTB12Q9Y330 459 aaPredicted RBP14.25□□□□□ -0.13
SMAD1-215ENST00000515385 MYH8P13535 1937 aa14.25□□□□□ -0.13
SMAD1-215ENST00000515385 NID2Q14112 1375 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 RANBP6O60518 1105 aaKnown RBP14.24□□□□□ -0.13
SMAD1-215ENST00000515385 KRT14P02533 472 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 SCTRP47872 440 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 CCNHP51946 323 aaPredicted RBP14.24□□□□□ -0.13
SMAD1-215ENST00000515385 SEC24CP53992 1094 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 RIPK1Q13546 671 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 SPA17Q15506 151 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 EZH2Q15910 746 aaKnown RBP14.24□□□□□ -0.13
SMAD1-215ENST00000515385 C1orf141Q5JVX7 400 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 TTLL7Q6ZT98 887 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 TRIM22Q8IYM9 498 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 CACNA2D3Q8IZS8 1091 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 ALS2CR12Q96Q35 445 aa14.24□□□□□ -0.13
SMAD1-215ENST00000515385 OSBPL9Q96SU4 736 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms