RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 KIR2DL2P43627 348 aaPredicted RBP5.54□□□□□ -1.52
CAST-242ENST00000515063 EIF6P56537 245 aaKnown RBP5.54□□□□□ -1.52
CAST-242ENST00000515063 ZNF648Q5T619 568 aaPredicted RBP5.54□□□□□ -1.52
CAST-242ENST00000515063 LSRQ86X29 649 aaPredicted RBP5.54□□□□□ -1.52
CAST-242ENST00000515063 C7orf61Q8IZ16 206 aa5.54□□□□□ -1.52
CAST-242ENST00000515063 USHBP1Q8N6Y0 703 aa5.54□□□□□ -1.52
CAST-242ENST00000515063 FBXO15Q8NCQ5 510 aaPredicted RBP5.54□□□□□ -1.52
CAST-242ENST00000515063 DSCC1Q9BVC3 393 aa5.54□□□□□ -1.52
CAST-242ENST00000515063 FOXP3Q9BZS1 431 aa5.54□□□□□ -1.52
CAST-242ENST00000515063 NSUN3Q9H649 340 aaKnown RBP5.54□□□□□ -1.52
CAST-242ENST00000515063 CCSER2Q9H7U1 834 aa5.54□□□□□ -1.52
CAST-242ENST00000515063 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.54□□□□□ -1.52
CAST-242ENST00000515063 KIAA1522Q9P206 1035 aaPredicted RBP5.54□□□□□ -1.52
CAST-242ENST00000515063 STRIP2Q9ULQ0 834 aa5.54□□□□□ -1.52
CAST-242ENST00000515063 EFR3BQ9Y2G0 817 aa5.54□□□□□ -1.52
CAST-242ENST00000515063 CFTRP13569 1480 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 BMP8BP34820 402 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 GJA8P48165 433 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 ERVFC1P60507 584 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 SNW1Q13573 536 aaKnown RBP5.53□□□□□ -1.52
CAST-242ENST00000515063 SLC14A2Q15849 920 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 ANKRD39Q53RE8 183 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 NOL9Q5SY16 702 aaKnown RBP5.53□□□□□ -1.52
CAST-242ENST00000515063 CWF19L1Q69YN2 538 aaKnown RBP5.53□□□□□ -1.52
CAST-242ENST00000515063 IRF2BP1Q8IU81 584 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 C19orf47Q8N9M1 422 aaKnown RBP5.53□□□□□ -1.52
CAST-242ENST00000515063 LINC01599Q8WXQ3 324 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 SEC16BQ96JE7 1060 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 MAP6Q96JE9 813 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 FCRL2Q96LA5 508 aaPredicted RBP5.53□□□□□ -1.52
CAST-242ENST00000515063 SRRTQ9BXP5 876 aaKnown RBP5.53□□□□□ -1.52
CAST-242ENST00000515063 DCP1AQ9NPI6 582 aaPredicted RBP5.53□□□□□ -1.52
CAST-242ENST00000515063 GINM1Q9NU53 330 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 GFOD1Q9NXC2 390 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 GPR160Q9UJ42 338 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 ZNF281Q9Y2X9 895 aa5.53□□□□□ -1.52
CAST-242ENST00000515063 FAM86C2PA6NEL3 165 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 GSNP06396 782 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 ACRP10323 421 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 MESP2Q0VG99 397 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 UNC5AQ6ZN44 842 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 PRR23BQ6ZRT6 265 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 CPLX3Q8WVH0 158 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 SLC26A8Q96RN1 970 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 DIRC2Q96SL1 478 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 RNF32Q9H0A6 362 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 PHAXQ9H814 394 aaKnown RBP5.52□□□□□ -1.53
CAST-242ENST00000515063 TNFRSF10DQ9UBN6 386 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 INPP5FQ9Y2H2 1132 aa5.52□□□□□ -1.53
CAST-242ENST00000515063 VPS8Q8N3P4 1428 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 RBAK-RBAKDNI3L0D1 243 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 NFIBO00712 420 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 FKTNO75072 461 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 TSPAN15O95858 294 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 ITGA4P13612 1032 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 TRHRP34981 398 aaPredicted RBP5.51□□□□□ -1.53
CAST-242ENST00000515063 RAP1GAPP47736 663 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 RBM10P98175 930 aaKnown RBP5.51□□□□□ -1.53
CAST-242ENST00000515063 TCEAL1Q15170 157 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 C9orf131Q5VYM1 1079 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 CCDC81Q6ZN84 652 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 CEP128Q6ZU80 1094 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 G6PC3Q9BUM1 346 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 C19orf44Q9H6X5 657 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 ZNF214Q9UL59 606 aaPredicted RBP5.51□□□□□ -1.53
CAST-242ENST00000515063 YBX2Q9Y2T7 364 aaKnown RBP5.51□□□□□ -1.53
CAST-242ENST00000515063 SF3B6Q9Y3B4 125 aaKnown RBP5.51□□□□□ -1.53
CAST-242ENST00000515063 PRXQ9BXM0 1461 aa5.51□□□□□ -1.53
CAST-242ENST00000515063 CLIP1P30622 1438 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 TMEM82A0PJX8 343 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 UNCXA6NJT0 531 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 BTBD11A6QL63 1104 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 C9IYK1 514 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 MEIS1O00470 390 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 NRDCO43847 1150 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 USP2O75604 605 aaPredicted RBP5.5□□□□□ -1.53
CAST-242ENST00000515063 ZNF205O95201 554 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 GIPRP48546 466 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 NASPP49321 788 aaPredicted RBP5.5□□□□□ -1.53
CAST-242ENST00000515063 GNL2Q13823 731 aaKnown RBP5.5□□□□□ -1.53
CAST-242ENST00000515063 TDRD10Q5VZ19 366 aaKnown RBP5.5□□□□□ -1.53
CAST-242ENST00000515063 OLFML2BQ68BL8 750 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 SYDE1Q6ZW31 735 aaPredicted RBP5.5□□□□□ -1.53
CAST-242ENST00000515063 VPS37DQ86XT2 251 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 CDADC1Q9BWV3 514 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 GBP3Q9H0R5 595 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 CRTAC1Q9NQ79 661 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 FHOD1Q9Y613 1164 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 TAF6LQ9Y6J9 622 aa5.5□□□□□ -1.53
CAST-242ENST00000515063 CUX1P39880 1505 aa5.49□□□□□ -1.53
CAST-242ENST00000515063 A0A087WZG4 1122 aa5.49□□□□□ -1.53
CAST-242ENST00000515063 WTIPA6NIX2 430 aaPredicted RBP5.49□□□□□ -1.53
CAST-242ENST00000515063 DBX1A6NMT0 343 aa5.49□□□□□ -1.53
CAST-242ENST00000515063 TMEM253P0C7T8 217 aa5.49□□□□□ -1.53
CAST-242ENST00000515063 CD247P20963 164 aa5.49□□□□□ -1.53
CAST-242ENST00000515063 PDE6BP35913 854 aa5.49□□□□□ -1.53
CAST-242ENST00000515063 NOP2P46087 812 aaKnown RBP5.49□□□□□ -1.53
CAST-242ENST00000515063 RBM25P49756 843 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms