RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 CCDC140Q96MF4 163 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 SLC52A1Q9NWF4 448 aa6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 DIS3Q9Y2L1 958 aaKnown RBP6.75□□□□□ -1.33
CALCOCO2-222ENST00000514006 CCDC194A0A1B0GVG4 234 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 FAM83GA6ND36 823 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 APPP05067 770 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 HOXB4P17483 251 aaPredicted RBP6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 USP11P51784 963 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 TRIM28Q13263 835 aaKnown RBP6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 GRB10Q13322 594 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 ZNF460Q14592 562 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 SF1Q15637 639 aaKnown RBP6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 MAMDC2Q7Z304 686 aaPredicted RBP6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 NECAB2Q7Z6G3 386 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 FIBCD1Q8N539 461 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 NEDD1Q8NHV4 660 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 WDR66Q8TBY9 1149 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 TRIM11Q96F44 468 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 MAGEB10Q96LZ2 347 aaPredicted RBP6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 NKX2-4Q9H2Z4 354 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 ACSS3Q9H6R3 686 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 DAGLAQ9Y4D2 1042 aa6.74□□□□□ -1.33
CALCOCO2-222ENST00000514006 SART1O43290 800 aaKnown RBP6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 GAS2O43903 313 aaKnown RBP6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 KPNA6O60684 536 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 KATNA1O75449 491 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 SLITRK5O94991 958 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 CPP00450 1065 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 JMJD7P0C870 316 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 ELNP15502 786 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 PCBP1Q15365 356 aaKnown RBP eCLIP6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 DHCR24Q15392 516 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 RNF219Q5W0B1 726 aaPredicted RBP6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 UBE2R2Q712K3 238 aaPredicted RBP6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 RAVER1Q8IY67 606 aaKnown RBP6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 AGGF1Q8N302 714 aaeCLIP6.73□□□□□ -1.339e-6■■□□□ 11.6
CALCOCO2-222ENST00000514006 TMEM145Q8NBT3 493 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 ZNF775Q96BV0 537 aaPredicted RBP6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 SCLYQ96I15 445 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 ZDHHC15Q96MV8 337 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 DSCC1Q9BVC3 393 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 YIPF2Q9BWQ6 316 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 PLVAPQ9BX97 442 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 PRDM14Q9GZV8 571 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 GEMIN8Q9NWZ8 242 aaKnown RBP6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 SLC5A4Q9NY91 659 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 PRR13Q9NZ81 148 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 GABBR1Q9UBS5 961 aa6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 SF3B6Q9Y3B4 125 aaKnown RBP6.73□□□□□ -1.33
CALCOCO2-222ENST00000514006 F8W735 103 aaPredicted RBP6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 BRINP1O60477 761 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 RASGRP1O95267 797 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 MAP4K4O95819 1239 aaPredicted RBP6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 ECI1P42126 302 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 PREPP48147 710 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 TBX4P57082 545 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 AMPD2Q01433 879 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 NTRK3Q16288 839 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 CFAP100Q494V2 611 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 TMEM130Q8N3G9 435 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 C8orf48Q96LL4 319 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 CYP26B1Q9NR63 512 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 ENAMQ9NRM1 1142 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 GFOD1Q9NXC2 390 aa6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 GPR55Q9Y2T6 319 aaPredicted RBP6.72□□□□□ -1.33
CALCOCO2-222ENST00000514006 PHLDB1Q86UU1 1377 aa6.71□□□□□ -1.33
CALCOCO2-222ENST00000514006 B4E1Z4 1266 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 FAM229AH3BQW9 127 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 GPR39O43194 453 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 PRC1O43663 620 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 VAMP4O75379 141 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 SCG5P05408 212 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 ITIH2P19823 946 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 CYP7A1P22680 504 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 ITKQ08881 620 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 SNW1Q13573 536 aaKnown RBP6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 STAT4Q14765 748 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 SEPT7Q16181 437 aaKnown RBP6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 NFE2Q16621 373 aaPredicted RBP6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 SLC35F1Q5T1Q4 408 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 USP53Q70EK8 1073 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 WDR75Q8IWA0 830 aaKnown RBP6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 CCAR1Q8IX12 1150 aaKnown RBP6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 CCDC146Q8IYE0 955 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 USP7Q93009 1102 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 TTC1Q99614 292 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 CEP41Q9BYV8 373 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 ASPSCR1Q9BZE9 553 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 MTFR1LQ9H019 292 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 SEMA6CQ9H3T2 930 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 LGR6Q9HBX8 967 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 PRDM10Q9NQV6 1147 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 TRAF6Q9Y4K3 522 aa6.71□□□□□ -1.34
CALCOCO2-222ENST00000514006 TCRBV16S1A1N1A0A5B0 115 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 PIK3R2O00459 728 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 AQP7O14520 342 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 GNB5O14775 395 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 PPP2R5AQ15172 486 aa6.7□□□□□ -1.34
CALCOCO2-222ENST00000514006 PRSS53Q2L4Q9 553 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms