RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, human

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFC-208	ENST00000512711	TMCO4	Q5TGY1	634 aa		4.09	□□□□□ -1.75
PDGFC-208	ENST00000512711	CEP128	Q6ZU80	1094 aa		4.09	□□□□□ -1.75
PDGFC-208	ENST00000512711	SIAH1	Q8IUQ4	282 aa		4.09	□□□□□ -1.75
PDGFC-208	ENST00000512711	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.09	□□□□□ -1.75
PDGFC-208	ENST00000512711	MAP6	Q96JE9	813 aa		4.09	□□□□□ -1.75
PDGFC-208	ENST00000512711	KRTAP17-1	Q9BYP8	105 aa		4.09	□□□□□ -1.75
PDGFC-208	ENST00000512711	CHST7	Q9NS84	486 aa		4.09	□□□□□ -1.75
PDGFC-208	ENST00000512711	FBXL21	Q9UKT6	434 aa		4.09	□□□□□ -1.75
PDGFC-208	ENST00000512711	PPT2	Q9UMR5	302 aa		4.09	□□□□□ -1.75
PDGFC-208	ENST00000512711	SSU72P8	A0A1W2PR75	194 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	GLDC	P23378	1020 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	ITGAE	P38570	1179 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	CCNF	P41002	786 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	BUD31	P41223	144 aa	Predicted RBP	4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	MFAP1	P55081	439 aa	Known RBP	4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	RTP1	P59025	263 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	CHRNE	Q04844	493 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	RAD51AP2	Q09MP3	1159 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	DUSP4	Q13115	394 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	SNX17	Q15036	470 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	LRRFIP1	Q32MZ4	808 aa	Known RBP	4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	TDRD10	Q5VZ19	366 aa	Known RBP	4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	DCAF15	Q66K64	600 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	INTS3	Q68E01	1043 aa	Known RBP	4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	USP48	Q86UV5	1035 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	PPFIBP1	Q86W92	1011 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	ANKS4B	Q8N8V4	417 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	PANK1	Q8TE04	598 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	SYTL4	Q96C24	671 aa	Predicted RBP	4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	SLC26A8	Q96RN1	970 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	KRTAP9-3	Q9BYQ3	159 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	MKRN2	Q9H000	416 aa	Known RBP	4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	IRF2BPL	Q9H1B7	796 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	SLC6A17	Q9H1V8	727 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	CWC22	Q9HCG8	908 aa	Known RBP	4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	FAM86C1	Q9NVL1	165 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	DDX41	Q9UJV9	622 aa	Known RBP	4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	ZNRF3	Q9ULT6	936 aa		4.08	□□□□□ -1.76
PDGFC-208	ENST00000512711	ADAMTS20	P59510	1910 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	FADS2P1	A8MWK0	482 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	NRDC	O43847	1150 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	TP53	P04637	393 aa	Predicted RBP	4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	VAV1	P15498	845 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	SLC14A2	Q15849	920 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	ADGRF1	Q5T601	910 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	C9orf131	Q5VYM1	1079 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	TMEM132E	Q6IEE7	984 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	CRTC3	Q6UUV7	619 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	TTLL10	Q6ZVT0	673 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	AMIGO3	Q86WK7	504 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	IRF2BP1	Q8IU81	584 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	BRF1	Q92994	677 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	AP5S1	Q9NUS5	200 aa		4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	SUCO	Q9UBS9	1254 aa	Known RBP	4.07	□□□□□ -1.76
PDGFC-208	ENST00000512711	LTBP3	Q9NS15	1303 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	ZBTB7C	A1YPR0	619 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	TCAF2	A6NFQ2	919 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	PEX10	O60683	326 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	KIR2DL1	P43626	348 aa	Predicted RBP	4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	KIR2DL2	P43627	348 aa	Predicted RBP	4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	LINC00310	P59036	64 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	ZNF445	P59923	1031 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	SSPN	Q14714	243 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	RTP2	Q5QGT7	225 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	FBXW10	Q5XX13	1052 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	UNC5A	Q6ZN44	842 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	CCDC81	Q6ZN84	652 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	METTL16	Q86W50	562 aa	Known RBP	4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	C7orf61	Q8IZ16	206 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	GINM1	Q9NU53	330 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	ERVK13-1	Q9NX77	482 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	PCDHB12	Q9Y5F1	795 aa		4.06	□□□□□ -1.76
PDGFC-208	ENST00000512711	TEX51	A0A1B0GUA7	166 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	ZNF205	O95201	554 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	RECK	O95980	971 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	VIPR1	P32241	457 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	BMP8B	P34820	402 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	PMS1	P54277	932 aa	Known RBP	4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	SRSF3	P84103	164 aa	Known RBP	4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	HSF5	Q4G112	596 aa	Predicted RBP	4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	CCDC144CP	Q8IYA2	1237 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	RNF34	Q969K3	372 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	FERD3L	Q96RJ6	166 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	CDADC1	Q9BWV3	514 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	SLC12A9	Q9BXP2	914 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	CNTD2	Q9H8S5	307 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	TNFRSF10D	Q9UBN6	386 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	MBD1	Q9UIS9	605 aa	Predicted RBP	4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	ZNF451	Q9Y4E5	1061 aa		4.05	□□□□□ -1.76
PDGFC-208	ENST00000512711	OR14I1	A6ND48	311 aa		4.04	□□□□□ -1.76
PDGFC-208	ENST00000512711		H0Y8X5	98 aa		4.04	□□□□□ -1.76
PDGFC-208	ENST00000512711	NUAK1	O60285	661 aa		4.04	□□□□□ -1.76
PDGFC-208	ENST00000512711	GSTM1	P09488	218 aa		4.04	□□□□□ -1.76
PDGFC-208	ENST00000512711	MSL3P1	P0C860	447 aa		4.04	□□□□□ -1.76
PDGFC-208	ENST00000512711	PNLIP	P16233	465 aa		4.04	□□□□□ -1.76
PDGFC-208	ENST00000512711	PRKCA	P17252	672 aa		4.04	□□□□□ -1.76
PDGFC-208	ENST00000512711	EPHB3	P54753	998 aa		4.04	□□□□□ -1.76
PDGFC-208	ENST00000512711	PAK2	Q13177	524 aa		4.04	□□□□□ -1.76

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