RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 MPHOSPH10O00566 681 aaKnown RBP7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 AREL1O15033 823 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 TUBP50607 506 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 FXR2P51116 673 aaKnown RBP eCLIP7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 DCTN1Q14203 1278 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 INTS11Q5TA45 600 aaKnown RBP7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 TMCO3Q6UWJ1 677 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 C3orf58Q8NDZ4 430 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 DDX11Q96FC9 970 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 MS4A3Q96HJ5 214 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 UBXN10Q96LJ8 280 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 CARD14Q9BXL6 1004 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 SLC26A6Q9BXS9 759 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 MYLK2Q9H1R3 596 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 TRMT13Q9NUP7 481 aaKnown RBP7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 TRIM35Q9UPQ4 493 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 UPK3BL1B0FP48 263 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 RASA4BC9J798 803 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 UPK3BL2E5RIL1 263 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 AKR1B1P15121 316 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 RHCEP18577 417 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 RHDQ02161 417 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 CTC1Q2NKJ3 1217 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 DESI1Q6ICB0 168 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 ZBTB38Q8NAP3 1195 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 PCDHB3Q9Y5E6 796 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 IKBKGQ9Y6K9 419 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 KIAA0586Q9BVV6 1533 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 KDM4FA0A1W2PPD8 638 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 TMEM110-MUSTN1A8MSY1 372 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 M0R2C6 588 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 M0R2N6 131 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 PRKD3O94806 890 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 EOMESO95936 686 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 SLC3A2P08195 630 aaKnown RBP7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 CD86P42081 329 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 SCNN1DP51172 638 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 SPATA1Q5VX52 437 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 SPATS2Q86XZ4 545 aaKnown RBP7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 TRMT2AQ8IZ69 625 aaKnown RBP7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 PHC3Q8NDX5 983 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 TBCBQ99426 244 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 WDR12Q9GZL7 423 aaKnown RBP7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 PIH1D1Q9NWS0 290 aaKnown RBP7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 FBXL5Q9UKA1 691 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 RCAN3Q9UKA8 241 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 SUPT16HQ9Y5B9 1047 aaKnown RBP7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 FHOD3Q2V2M9 1422 aa7.26□□□□□ -1.25
TRAPPC11-209ENST00000512476 CEP170Q5SW79 1584 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 HTATSF1O43719 755 aaKnown RBP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 BRINP1O60477 761 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 DNAJC8O75937 253 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 CNOT4O95628 575 aaKnown RBP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 TM4SF4P48230 202 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 GABREP78334 506 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 HTRA3P83110 453 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 MFSD6Q6ZSS7 791 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 BTN2A1Q7KYR7 527 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 LSRQ86X29 649 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 IQCF2Q8IXL9 164 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 KISS1RQ969F8 398 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 NKD1Q969G9 470 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 L3MBTL2Q969R5 705 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 ZDHHC16Q969W1 377 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 KIAA1191Q96A73 305 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 GPATCH1Q9BRR8 931 aaKnown RBP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 PUS7LQ9H0K6 701 aaKnown RBP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 TOPORSQ9NS56 1045 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 KLK14Q9P0G3 267 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 SEL1LQ9UBV2 794 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 TRIM75PA6NK02 468 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 TBX18O95935 607 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 ALAS1P13196 640 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 CD151P48509 253 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 FXR1P51114 621 aaKnown RBP eCLIP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 CCNG2Q16589 344 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 FAM205BPQ63HN1 556 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 ITPRIPL1Q6GPH6 555 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 B3GNT9Q6UX72 402 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 ABTB2Q8N961 1025 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 FUBP3Q96I24 572 aaKnown RBP eCLIP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 CCDC138Q96M89 665 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 UROC1Q96N76 676 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 SEC62Q99442 399 aaKnown RBP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 RUSC1Q9BVN2 902 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 SPATA9Q9BWV2 254 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 ATP6V0A4Q9HBG4 840 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 SCHIP1Q9P0W5 487 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 SERTAD1Q9UHV2 236 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 PCDHB11Q9Y5F2 797 aa7.25□□□□□ -1.25
TRAPPC11-209ENST00000512476 UGGT2Q9NYU1 1516 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 NUP160Q12769 1436 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 FAM170AA1A519 330 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 PPP1R12BO60237 982 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 CNTFP26441 200 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 MAN2A2P49641 1150 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 PTK2Q05397 1052 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 MAP4K3Q8IVH8 894 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 SLITRK4Q8IW52 837 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms