RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 FAM83BQ5T0W9 1011 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 IFFO2Q5TF58 517 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 WWC2Q6AWC2 1192 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 TYW1BQ6NUM6 668 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 ERO1BQ86YB8 467 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 RBM46Q8TBY0 533 aaKnown RBP11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 RRP36Q96EU6 259 aaKnown RBP11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 FEZ1Q99689 392 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 ZSCAN16Q9H4T2 348 aaPredicted RBP11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 BARHL2Q9NY43 387 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 VPS54Q9P1Q0 977 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 CSADQ9Y600 493 aa11.53□□□□□ -0.56
PDGFRA-209ENST00000512143 PTPRFP10586 1907 aa11.52□□□□□ -0.56
PDGFRA-209ENST00000512143 KIF28PB7ZC32 967 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 STXBP3O00186 592 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 KIF3CO14782 793 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 ZBTB5O15062 677 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 BAG4O95429 457 aaKnown RBP11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 VCAM1P19320 739 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 U2AF2P26368 475 aaKnown RBP eCLIP11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 STAT2P52630 851 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 FOSBP53539 338 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 DGKZQ13574 1117 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 ZYXQ15942 572 aaKnown RBP11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 SYDE2Q5VT97 1194 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 CST9Q5W186 159 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 FERMT3Q86UX7 667 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 CHURC1Q8WUH1 139 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 FOXD4L4Q8WXT5 416 aaPredicted RBP11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 VAT1LQ9HCJ6 419 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 FEM1BQ9UK73 627 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 PRR12Q9ULL5 1215 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 KCNJ14Q9UNX9 436 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 KCNH4Q9UQ05 1017 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 RLFQ13129 1914 aa11.52□□□□□ -0.57
PDGFRA-209ENST00000512143 TCHHQ07283 1943 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 ESYT2A0FGR8 921 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 TRIM75PA6NK02 468 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 hCG_1984214I3L0E3 225 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 M0R2N6 131 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 CXCL11O14625 94 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 RAD21O60216 631 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 XBP1P17861 261 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 PPIL2Q13356 520 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 TRIM29Q14134 588 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 QRICH1Q2TAL8 776 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 ZNF713Q8N859 430 aaPredicted RBP11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 PIBF1Q8WXW3 757 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 GPKOWQ92917 476 aaPredicted RBP eCLIP11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 TNFRSF25Q93038 417 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 CHAMP1Q96JM3 812 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 FOXP1Q9H334 677 aaPredicted RBP11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 ELP3Q9H9T3 547 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 GBA2Q9HCG7 927 aaPredicted RBP11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 PASKQ96RG2 1323 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 TRPM7Q96QT4 1865 aa11.51□□□□□ -0.57
PDGFRA-209ENST00000512143 A0A0G2JLL6 359 aaPredicted RBP11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 BTBD18B2RXH4 712 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 IRF6O14896 467 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 ADAMTS3O15072 1205 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 CELF2O95319 508 aaKnown RBP11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 GJA5P36382 358 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 HMGCS2P54868 508 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 MOGSQ13724 837 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 TTLL12Q14166 644 aaPredicted RBP11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 CDC37Q16543 378 aaPredicted RBP11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 GALNT17Q6IS24 598 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 FAM173BQ6P4H8 233 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 HEATR3Q7Z4Q2 680 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 BRAPQ7Z569 592 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 PRRT2Q7Z6L0 340 aaPredicted RBP11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 HOMER1Q86YM7 354 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 DIS3L2Q8IYB7 885 aaKnown RBP11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 DAGLBQ8NCG7 672 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 ZMYND12Q9H0C1 365 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 FBXO28Q9NVF7 368 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 SEC63Q9UGP8 760 aaKnown RBP11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 ADAMTS5Q9UNA0 930 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 ATP6V1DQ9Y5K8 247 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 PARP14Q460N5 1801 aa11.5□□□□□ -0.57
PDGFRA-209ENST00000512143 LOC285556D6RIA3 1793 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 SMCHD1A6NHR9 2005 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 CALML3P27482 149 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 MCM4P33991 863 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 DNM1Q05193 864 aaKnown RBP11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 SAFBQ15424 915 aaKnown RBP eCLIP11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 PPP1R18Q6NYC8 613 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 CATSPERGQ6ZRH7 1159 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 NOSTRINQ8IVI9 506 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 PRPF38AQ8NAV1 312 aaKnown RBP11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 COA7Q96BR5 231 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 OTUD5Q96G74 571 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 SLF1Q9BQI6 1058 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 RPAP3Q9H6T3 665 aaPredicted RBP11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 ZNF408Q9H9D4 720 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 GPBP1L1Q9HC44 474 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms