RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 RICTORQ6R327 1708 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 CEP104O60308 925 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 CCNT1O60563 726 aaKnown RBP12.01□□□□□ -0.49
CPNE4-209ENST00000512055 RPSAP08865 295 aaKnown RBP12.01□□□□□ -0.49
CPNE4-209ENST00000512055 TCP10Q12799 353 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 PPP2R5BQ15173 497 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 CCDC92Q53HC0 331 aaPredicted RBP12.01□□□□□ -0.49
CPNE4-209ENST00000512055 BLZF1Q9H2G9 400 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 CMA1P23946 247 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 CCDC25Q86WR0 208 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 NKIRAS1Q9NYS0 192 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 RTEL1Q9NZ71 1219 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 TAF6LQ9Y6J9 622 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 PALLDQ8WX93 1383 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 SYF2O95926 243 aaKnown RBP12.01□□□□□ -0.49
CPNE4-209ENST00000512055 GOLGA8HP0CJ92 632 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 TXKP42681 527 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 DPP8Q6V1X1 898 aaPredicted RBP12.01□□□□□ -0.49
CPNE4-209ENST00000512055 ARPP21Q9UBL0 812 aaPredicted RBP12.01□□□□□ -0.49
CPNE4-209ENST00000512055 FAM196AQ6ZSG2 479 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 SMARCC2Q8TAQ2 1214 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 MMRN2Q9H8L6 949 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 PFDN4Q9NQP4 134 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 MYO5BQ9ULV0 1848 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 TMEM87AQ8NBN3 555 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 TSC1Q92574 1164 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 EYA3Q99504 573 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 NRBP1Q9UHY1 535 aa12.01□□□□□ -0.49
CPNE4-209ENST00000512055 INPP1P49441 399 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 PPP2R3AQ06190 1150 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 GPKOWQ92917 476 aaPredicted RBP eCLIP12□□□□□ -0.49
CPNE4-209ENST00000512055 STRBPQ96SI9 672 aaKnown RBP12□□□□□ -0.49
CPNE4-209ENST00000512055 RCOR1Q9UKL0 485 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 MTUS1Q9ULD2 1270 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 SH2B2O14492 632 aaPredicted RBP12□□□□□ -0.49
CPNE4-209ENST00000512055 ATP2A1O14983 1001 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 VPS52Q8N1B4 723 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 UBLCP1Q8WVY7 318 aaPredicted RBP12□□□□□ -0.49
CPNE4-209ENST00000512055 SELENOOQ9BVL4 669 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
CPNE4-209ENST00000512055 KCNQ2O43526 872 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 PHEXP78562 749 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 KIF23Q02241 960 aaPredicted RBP12□□□□□ -0.49
CPNE4-209ENST00000512055 IFI16Q16666 785 aaKnown RBP12□□□□□ -0.49
CPNE4-209ENST00000512055 SMIM5Q71RC9 77 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 NUDCD3Q8IVD9 361 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 MLKLQ8NB16 471 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 PNMA1Q8ND90 353 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 KAZALD1Q96I82 304 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 MRPL46Q9H2W6 279 aaKnown RBP12□□□□□ -0.49
CPNE4-209ENST00000512055 POLE2P56282 527 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
CPNE4-209ENST00000512055 STOX1Q6ZVD7 989 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 TBC1D10CQ8IV04 446 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 ATP2A3Q93084 1043 aa12□□□□□ -0.49
CPNE4-209ENST00000512055 USP42Q9H9J4 1324 aaKnown RBP12□□□□□ -0.49
CPNE4-209ENST00000512055 GOLGA6CA6NDK9 693 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 HIP1RO75146 1068 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 GOLGA6DP0CG33 693 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 ERCC5P28715 1186 aaPredicted RBP11.99□□□□□ -0.49
CPNE4-209ENST00000512055 C11orf57Q6ZUT1 292 aaPredicted RBP11.99□□□□□ -0.49
CPNE4-209ENST00000512055 IGSF22Q8N9C0 903 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 LRRC27Q9C0I9 530 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 GOLGA6AQ9NYA3 693 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 SPDYE3A6NKU9 549 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 SH3BP5O60239 455 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 TBCAO75347 108 aaKnown RBP11.99□□□□□ -0.49
CPNE4-209ENST00000512055 LIG3P49916 1009 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 NR5A1Q13285 461 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 LINC00301Q8NCQ3 95 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.99□□□□□ -0.49
CPNE4-209ENST00000512055 SLC39A14Q15043 492 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 ERMNQ8TAM6 284 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 PLVAPQ9BX97 442 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 PPP1R9AQ9ULJ8 1098 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 EVCP57679 992 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.99□□□□□ -0.49
CPNE4-209ENST00000512055 PALMDQ9NP74 551 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 SYNRGQ9UMZ2 1314 aa11.99□□□□□ -0.49
CPNE4-209ENST00000512055 DNAJC8O75937 253 aaPredicted RBP11.98□□□□□ -0.49
CPNE4-209ENST00000512055 ARID5AQ03989 594 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 E2F4Q16254 413 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 SLC24A3Q9HC58 644 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 SIGLEC1Q9BZZ2 1709 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 PXDNLA1KZ92 1463 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 PDE4DQ08499 809 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 DPCR1Q3MIW9 517 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 CLEC17AQ6ZS10 378 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 ARHGAP24Q8N264 748 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 FERMT1Q9BQL6 677 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 TTF2Q9UNY4 1162 aaKnown RBP11.98□□□□□ -0.49
CPNE4-209ENST00000512055 AKR1B15C9JRZ8 316 aaPredicted RBP11.98□□□□□ -0.49
CPNE4-209ENST00000512055 CYLC1P35663 651 aaPredicted RBP11.98□□□□□ -0.49
CPNE4-209ENST00000512055 RANBP1P43487 201 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 SCNN1DP51172 638 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 PHLDB3Q6NSJ2 640 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 SYCP3Q8IZU3 236 aa11.98□□□□□ -0.49
CPNE4-209ENST00000512055 FERMT2Q96AC1 680 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms