RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 TCEAL1Q15170 157 aa5.11□□□□□ -1.59
CHD1-207ENST00000511628 RUFY4Q6ZNE9 571 aa5.11□□□□□ -1.59
CHD1-207ENST00000511628 ANKLE2Q86XL3 938 aa5.11□□□□□ -1.59
CHD1-207ENST00000511628 SIRT2Q8IXJ6 389 aa5.11□□□□□ -1.59
CHD1-207ENST00000511628 LINC00116Q8NCU8 138 aa5.11□□□□□ -1.59
CHD1-207ENST00000511628 SRRTQ9BXP5 876 aaKnown RBP5.11□□□□□ -1.59
CHD1-207ENST00000511628 CWC22Q9HCG8 908 aaKnown RBP5.11□□□□□ -1.59
CHD1-207ENST00000511628 SLC12A7Q9Y666 1083 aa5.11□□□□□ -1.59
CHD1-207ENST00000511628 BTBD11A6QL63 1104 aa5.1□□□□□ -1.59
CHD1-207ENST00000511628 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.1□□□□□ -1.59
CHD1-207ENST00000511628 USP2O75604 605 aaPredicted RBP5.1□□□□□ -1.59
CHD1-207ENST00000511628 GSNP06396 782 aa5.1□□□□□ -1.59
CHD1-207ENST00000511628 ERCC5P28715 1186 aaPredicted RBP5.1□□□□□ -1.59
CHD1-207ENST00000511628 GNPTABQ3T906 1256 aa5.1□□□□□ -1.59
CHD1-207ENST00000511628 UNC5AQ6ZN44 842 aa5.1□□□□□ -1.59
CHD1-207ENST00000511628 ZNF605Q86T29 641 aa5.1□□□□□ -1.59
CHD1-207ENST00000511628 TAB3Q8N5C8 712 aaPredicted RBP5.1□□□□□ -1.59
CHD1-207ENST00000511628 KCNN1Q92952 543 aa5.1□□□□□ -1.59
CHD1-207ENST00000511628 MAP6Q96JE9 813 aa5.1□□□□□ -1.59
CHD1-207ENST00000511628 MINPP1Q9UNW1 487 aa5.1□□□□□ -1.59
CHD1-207ENST00000511628 TAF6LQ9Y6J9 622 aa5.1□□□□□ -1.59
CHD1-207ENST00000511628 TCAF2A6NFQ2 919 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 C9IYK1 514 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 PSPNO60542 156 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 ACRP10323 421 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 ITGA4P13612 1032 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 KIR2DL1P43626 348 aaPredicted RBP5.09□□□□□ -1.59
CHD1-207ENST00000511628 KIR2DL2P43627 348 aaPredicted RBP5.09□□□□□ -1.59
CHD1-207ENST00000511628 NASPP49321 788 aaPredicted RBP5.09□□□□□ -1.59
CHD1-207ENST00000511628 RTP1P59025 263 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 FZD5Q13467 585 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 NR0B2Q15466 257 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 ADGRF1Q5T601 910 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 DCAF15Q66K64 600 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 ADAT2Q7Z6V5 191 aaKnown RBP5.09□□□□□ -1.59
CHD1-207ENST00000511628 LSRQ86X29 649 aaPredicted RBP5.09□□□□□ -1.59
CHD1-207ENST00000511628 VPS37DQ86XT2 251 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 JAMLQ86YT9 394 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 OR6P1Q8NGX9 317 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 SLC26A8Q96RN1 970 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 TNFRSF10DQ9UBN6 386 aa5.09□□□□□ -1.59
CHD1-207ENST00000511628 SF3B6Q9Y3B4 125 aaKnown RBP5.09□□□□□ -1.59
CHD1-207ENST00000511628 A0A1W2PQJ5 194 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 DBX1A6NMT0 343 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 GSTM1P09488 218 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 BMP8BP34820 402 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 ARL4AP40617 200 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 NOP2P46087 812 aaKnown RBP5.08□□□□□ -1.6
CHD1-207ENST00000511628 GALK1P51570 392 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 MESP2Q0VG99 397 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 GNL2Q13823 731 aaKnown RBP5.08□□□□□ -1.6
CHD1-207ENST00000511628 TIGD5Q53EQ6 642 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 HEATR6Q6AI08 1181 aaKnown RBP5.08□□□□□ -1.6
CHD1-207ENST00000511628 GALNT18Q6P9A2 607 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 CRTC3Q6UUV7 619 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 ZPBP2Q6X784 338 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 IRF2BP1Q8IU81 584 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 RBBP8NLQ8NC74 664 aaPredicted RBP5.08□□□□□ -1.6
CHD1-207ENST00000511628 BHLHE22Q8NFJ8 381 aaPredicted RBP5.08□□□□□ -1.6
CHD1-207ENST00000511628 ZSCAN18Q8TBC5 510 aaPredicted RBP5.08□□□□□ -1.6
CHD1-207ENST00000511628 LINC01599Q8WXQ3 324 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 BRF1Q92994 677 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 INTS4Q96HW7 963 aaKnown RBP5.08□□□□□ -1.6
CHD1-207ENST00000511628 FCRL2Q96LA5 508 aaPredicted RBP5.08□□□□□ -1.6
CHD1-207ENST00000511628 TOX2Q96NM4 488 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 TGIF2Q9GZN2 237 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 GBP3Q9H0R5 595 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 ACBD3Q9H3P7 528 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 PHAXQ9H814 394 aaKnown RBP5.08□□□□□ -1.6
CHD1-207ENST00000511628 KCNK12Q9HB15 430 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 CAPN10Q9HC96 672 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 PRR13Q9NZ81 148 aa5.08□□□□□ -1.6
CHD1-207ENST00000511628 YBX2Q9Y2T7 364 aaKnown RBP5.08□□□□□ -1.6
CHD1-207ENST00000511628 OR14I1A6ND48 311 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 WTIPA6NIX2 430 aaPredicted RBP5.07□□□□□ -1.6
CHD1-207ENST00000511628 VAV1P15498 845 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 SOX9P48436 509 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 PPP2R5DQ14738 602 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 ZYXQ15942 572 aaKnown RBP5.07□□□□□ -1.6
CHD1-207ENST00000511628 NAALADL2Q58DX5 795 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 AXDND1Q5T1B0 1012 aaPredicted RBP5.07□□□□□ -1.6
CHD1-207ENST00000511628 OLFML2BQ68BL8 750 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 FIBCD1Q8N539 461 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 ANAPC16Q96DE5 110 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 HHIPL1Q96JK4 782 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 ZDHHC15Q96MV8 337 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 NOL6Q9H6R4 1146 aaKnown RBP5.07□□□□□ -1.6
CHD1-207ENST00000511628 GP6Q9HCN6 339 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 AP5S1Q9NUS5 200 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 GPR55Q9Y2T6 319 aaPredicted RBP5.07□□□□□ -1.6
CHD1-207ENST00000511628 SUGT1Q9Y2Z0 365 aa5.07□□□□□ -1.6
CHD1-207ENST00000511628 TMEM82A0PJX8 343 aa5.06□□□□□ -1.6
CHD1-207ENST00000511628 NRDCO43847 1150 aa5.06□□□□□ -1.6
CHD1-207ENST00000511628 PPM1BO75688 479 aa5.06□□□□□ -1.6
CHD1-207ENST00000511628 ZNF205O95201 554 aa5.06□□□□□ -1.6
CHD1-207ENST00000511628 TSPAN15O95858 294 aa5.06□□□□□ -1.6
CHD1-207ENST00000511628 SSBP05455 408 aaKnown RBP eCLIP5.06□□□□□ -1.6
CHD1-207ENST00000511628 CD247P20963 164 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms