RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ALX3O95076 343 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 EYA4O95677 639 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 CPP00450 1065 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 CYP7A1P22680 504 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 USP11P51784 963 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 GTF2IRD2BQ6EKJ0 949 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 GTF2IRD2Q86UP8 949 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 FERMT3Q86UX7 667 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 DZIP1LQ8IYY4 767 aaKnown RBP7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 KCTD13Q8WZ19 329 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 PTPRN2Q92932 1015 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 NACC1Q96RE7 527 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 UBL7Q96S82 380 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 PRDM14Q9GZV8 571 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 SLC52A2Q9HAB3 445 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 CYP26B1Q9NR63 512 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 C1GALT1Q9NS00 363 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 DAGLAQ9Y4D2 1042 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 DYNC1LI2O43237 492 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 ASLP04424 464 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 NFICP08651 508 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 NOS3P29474 1203 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 NFKB2Q00653 900 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 TESK1Q15569 626 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 GRIK4Q16099 956 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 NTRK3Q16288 839 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 NOL9Q5SY16 702 aaKnown RBP7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 BRAPQ7Z569 592 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 AHI1Q8N157 1196 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 FIBCD1Q8N539 461 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 ADCY4Q8NFM4 1077 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 MYRFLQ96LU7 910 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 ORAI3Q9BRQ5 295 aa7.54□□□□□ -1.2
HMGB1P47-201ENST00000511281 SIGLEC6O43699 453 aa7.53□□□□□ -1.2
HMGB1P47-201ENST00000511281 KCNH1O95259 989 aa7.53□□□□□ -1.2
HMGB1P47-201ENST00000511281 KIR3DL1P43629 444 aa7.53□□□□□ -1.2
HMGB1P47-201ENST00000511281 CYP4F3Q08477 520 aa7.53□□□□□ -1.2
HMGB1P47-201ENST00000511281 SGO2Q562F6 1265 aa7.53□□□□□ -1.2
HMGB1P47-201ENST00000511281 FAM214BQ7L5A3 538 aa7.53□□□□□ -1.2
HMGB1P47-201ENST00000511281 FBLIM1Q8WUP2 373 aa7.53□□□□□ -1.2
HMGB1P47-201ENST00000511281 WFDC12Q8WWY7 111 aa7.53□□□□□ -1.2
HMGB1P47-201ENST00000511281 FBXL21Q9UKT6 434 aa7.53□□□□□ -1.2
HMGB1P47-201ENST00000511281 SF3B6Q9Y3B4 125 aaKnown RBP7.53□□□□□ -1.2
HMGB1P47-201ENST00000511281 GLB1P16278 677 aa7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 SNW1Q13573 536 aaKnown RBP7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 ADGRE1Q14246 886 aa7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 DHCR24Q15392 516 aa7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 BRDTQ58F21 947 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 CT47A1Q5JQC4 288 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 STYK1Q6J9G0 422 aa7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 NOL8Q76FK4 1167 aaKnown RBP7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 ANKLE2Q86XL3 938 aa7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 TMEM145Q8NBT3 493 aa7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 ENOX1Q8TC92 643 aaKnown RBP7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 SCLYQ96I15 445 aa7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 CEP89Q96ST8 783 aa7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 DUSP23Q9BVJ7 150 aa7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 NOL6Q9H6R4 1146 aaKnown RBP7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 CHPF2Q9P2E5 772 aa7.52□□□□□ -1.21
HMGB1P47-201ENST00000511281 CPEP16870 476 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 MAP4P27816 1152 aaKnown RBP7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 AMPD2Q01433 879 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 SF1Q15637 639 aaKnown RBP7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 ODR4Q5SWX8 454 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 ACBD5Q5T8D3 534 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 TREML4Q6UXN2 200 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 RSPO2Q6UXX9 243 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 DDX46Q7L014 1031 aaKnown RBP7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 NECAB2Q7Z6G3 386 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 ALYREFQ86V81 257 aaKnown RBP7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 FAM20CQ8IXL6 584 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 ARMC10Q8N2F6 343 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 BEND7Q8N7W2 519 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 DTWD2Q8NBA8 298 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 COPS5Q92905 334 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 BRF1Q92994 677 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 Q96M66 194 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 GFOD1Q9NXC2 390 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 NDOR1Q9UHB4 597 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 USP21Q9UK80 565 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 KCNH3Q9ULD8 1083 aa7.51□□□□□ -1.21
HMGB1P47-201ENST00000511281 B4E1Z4 1266 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 IGF2BP3O00425 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 ZNF865P0CJ78 1059 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 NAT1P18440 290 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 ITIH2P19823 946 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 IGFALSP35858 605 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 MBTPS1Q14703 1052 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 WWC2Q6AWC2 1192 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 CNNM4Q6P4Q7 775 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 PODNQ7Z5L7 613 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 FGD2Q7Z6J4 655 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 TOP6BLQ8N6T0 577 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 KREMEN2Q8NCW0 462 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 GIMAP7Q8NHV1 300 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 PIWIL2Q8TC59 973 aaKnown RBP7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 DCAF4Q8WV16 495 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 MTFR1LQ9H019 292 aa7.5□□□□□ -1.21
HMGB1P47-201ENST00000511281 THRAP3Q9Y2W1 955 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms