RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 DPP9Q86TI2 863 aa14.4□□□□□ -0.1
CLDND1-223ENST00000511081 RILPL2Q969X0 211 aa14.4□□□□□ -0.1
CLDND1-223ENST00000511081 PAWRQ96IZ0 340 aaKnown RBP14.4□□□□□ -0.1
CLDND1-223ENST00000511081 SLF1Q9BQI6 1058 aa14.4□□□□□ -0.1
CLDND1-223ENST00000511081 FEM1BQ9UK73 627 aa14.4□□□□□ -0.1
CLDND1-223ENST00000511081 SSUH2Q9Y2M2 353 aa14.4□□□□□ -0.1
CLDND1-223ENST00000511081 CCDC171Q6TFL3 1326 aa14.4□□□□□ -0.1
CLDND1-223ENST00000511081 FDX1P10109 184 aa14.39□□□□□ -0.11
CLDND1-223ENST00000511081 PDE4AP27815 886 aa14.39□□□□□ -0.11
CLDND1-223ENST00000511081 COPB2P35606 906 aa14.39□□□□□ -0.11
CLDND1-223ENST00000511081 PLS1Q14651 629 aa14.39□□□□□ -0.11
CLDND1-223ENST00000511081 SLFN13Q68D06 897 aa14.39□□□□□ -0.11
CLDND1-223ENST00000511081 NCAPG2Q86XI2 1143 aa14.39□□□□□ -0.11
CLDND1-223ENST00000511081 GMCL1Q96IK5 515 aa14.39□□□□□ -0.11
CLDND1-223ENST00000511081 SLC38A10Q9HBR0 1119 aa14.39□□□□□ -0.11
CLDND1-223ENST00000511081 TCP11L1Q9NUJ3 509 aa14.39□□□□□ -0.11
CLDND1-223ENST00000511081 DIS3Q9Y2L1 958 aaKnown RBP14.39□□□□□ -0.11
CLDND1-223ENST00000511081 H0YGN5 161 aa14.38□□□□□ -0.11
CLDND1-223ENST00000511081 PCP11498 1178 aaKnown RBP14.38□□□□□ -0.11
CLDND1-223ENST00000511081 COL6A1P12109 1028 aa14.38□□□□□ -0.11
CLDND1-223ENST00000511081 BMP3P12645 472 aa14.38□□□□□ -0.11
CLDND1-223ENST00000511081 CYP2C19P33261 490 aa14.38□□□□□ -0.11
CLDND1-223ENST00000511081 MFAP1P55081 439 aaKnown RBP14.38□□□□□ -0.11
CLDND1-223ENST00000511081 ZNF792Q3KQV3 632 aa14.38□□□□□ -0.11
CLDND1-223ENST00000511081 TRPV1Q8NER1 839 aa14.38□□□□□ -0.11
CLDND1-223ENST00000511081 DIS3LQ8TF46 1054 aaKnown RBP14.38□□□□□ -0.11
CLDND1-223ENST00000511081 DPF3Q92784 378 aa14.38□□□□□ -0.11
CLDND1-223ENST00000511081 TEX13BQ9BXU2 312 aa14.38□□□□□ -0.11
CLDND1-223ENST00000511081 NBPF3Q9H094 633 aa14.38□□□□□ -0.11
CLDND1-223ENST00000511081 SLC5A4Q9NY91 659 aa14.38□□□□□ -0.11
CLDND1-223ENST00000511081 TSPY2A6NKD2 308 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 HIP1O00291 1037 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 RAD21O60216 631 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 MSCO60682 206 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 ZBED4O75132 1171 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 SLC34A2O95436 690 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 CYBAP13498 195 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 OAZ1P54368 228 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 RCSD1Q6JBY9 416 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 LRRC47Q8N1G4 583 aaKnown RBP14.37□□□□□ -0.11
CLDND1-223ENST00000511081 CHURC1Q8WUH1 139 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 MAML3Q96JK9 1138 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 RIPK3Q9Y572 518 aa14.37□□□□□ -0.11
CLDND1-223ENST00000511081 DNAJC25-GNG10A0A024R161 153 aa14.36□□□□□ -0.11
CLDND1-223ENST00000511081 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
CLDND1-223ENST00000511081 NMT2O60551 498 aa14.36□□□□□ -0.11
CLDND1-223ENST00000511081 NT5C2P49902 561 aa14.36□□□□□ -0.11
CLDND1-223ENST00000511081 AKNAD1Q5T1N1 836 aa14.36□□□□□ -0.11
CLDND1-223ENST00000511081 STAG1Q8WVM7 1258 aa14.36□□□□□ -0.11
CLDND1-223ENST00000511081 TTC14Q96N46 770 aa14.36□□□□□ -0.11
CLDND1-223ENST00000511081 MMP19Q99542 508 aa14.36□□□□□ -0.11
CLDND1-223ENST00000511081 DDX20Q9UHI6 824 aaKnown RBP14.36□□□□□ -0.11
CLDND1-223ENST00000511081 NRBP1Q9UHY1 535 aa14.36□□□□□ -0.11
CLDND1-223ENST00000511081 NR2E3Q9Y5X4 410 aa14.36□□□□□ -0.11
CLDND1-223ENST00000511081 SMCHD1A6NHR9 2005 aa14.36□□□□□ -0.11
CLDND1-223ENST00000511081 ALPK3Q96L96 1907 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 TMEM232C9JQI7 657 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 MCCP23508 829 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 KCTD2Q14681 263 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 HABP4Q5JVS0 413 aaKnown RBP14.35□□□□□ -0.11
CLDND1-223ENST00000511081 SNRNP48Q6IEG0 339 aaKnown RBP14.35□□□□□ -0.11
CLDND1-223ENST00000511081 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
CLDND1-223ENST00000511081 FAM160B2Q86V87 743 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 KIFC2Q96AC6 838 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 PRO3102Q9H379 93 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 C11orf49Q9H6J7 331 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 STX8Q9UNK0 236 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 PFASO15067 1338 aa14.35□□□□□ -0.11
CLDND1-223ENST00000511081 SEPT4O43236 478 aa14.34□□□□□ -0.11
CLDND1-223ENST00000511081 GSPT1P15170 499 aaKnown RBP14.34□□□□□ -0.11
CLDND1-223ENST00000511081 SLC1A4P43007 532 aa14.34□□□□□ -0.11
CLDND1-223ENST00000511081 STAT2P52630 851 aa14.34□□□□□ -0.11
CLDND1-223ENST00000511081 IRX6P78412 446 aaPredicted RBP14.34□□□□□ -0.11
CLDND1-223ENST00000511081 TTC22Q5TAA0 569 aa14.34□□□□□ -0.11
CLDND1-223ENST00000511081 BTNL9Q6UXG8 535 aa14.34□□□□□ -0.11
CLDND1-223ENST00000511081 MFSD6Q6ZSS7 791 aa14.34□□□□□ -0.11
CLDND1-223ENST00000511081 MSL3Q8N5Y2 521 aaKnown RBP14.34□□□□□ -0.11
CLDND1-223ENST00000511081 CHST13Q8NET6 341 aa14.34□□□□□ -0.11
CLDND1-223ENST00000511081 TINF2Q9BSI4 451 aa14.34□□□□□ -0.11
CLDND1-223ENST00000511081 DIAPH3Q9NSV4 1193 aa14.34□□□□□ -0.11
CLDND1-223ENST00000511081 COLQQ9Y215 455 aaPredicted RBP14.34□□□□□ -0.11
CLDND1-223ENST00000511081 ZNF536O15090 1300 aa14.34□□□□□ -0.11
CLDND1-223ENST00000511081 PLXNA1Q9UIW2 1896 aa14.33□□□□□ -0.11
CLDND1-223ENST00000511081 TRIOBPQ9H2D6 2365 aa14.33□□□□□ -0.11
CLDND1-223ENST00000511081 ZNF213O14771 459 aa14.33□□□□□ -0.12
CLDND1-223ENST00000511081 EVI5O60447 810 aa14.33□□□□□ -0.12
CLDND1-223ENST00000511081 PGK2P07205 417 aa14.33□□□□□ -0.12
CLDND1-223ENST00000511081 TOP1P11387 765 aaKnown RBP14.33□□□□□ -0.12
CLDND1-223ENST00000511081 HAND2P61296 217 aa14.33□□□□□ -0.12
CLDND1-223ENST00000511081 MAMDC4Q6UXC1 1216 aa14.33□□□□□ -0.12
CLDND1-223ENST00000511081 ZNF467Q7Z7K2 595 aaPredicted RBP14.33□□□□□ -0.12
CLDND1-223ENST00000511081 TBC1D10CQ8IV04 446 aa14.33□□□□□ -0.12
CLDND1-223ENST00000511081 CPXCR1Q8N123 301 aa14.33□□□□□ -0.12
CLDND1-223ENST00000511081 DCAF4Q8WV16 495 aa14.33□□□□□ -0.12
CLDND1-223ENST00000511081 TMEM47Q9BQJ4 181 aa14.33□□□□□ -0.12
CLDND1-223ENST00000511081 RNF41Q9H4P4 317 aaPredicted RBP14.33□□□□□ -0.12
CLDND1-223ENST00000511081 RAVER2Q9HCJ3 691 aaKnown RBP14.33□□□□□ -0.12
CLDND1-223ENST00000511081 FBXO40Q9UH90 709 aa14.33□□□□□ -0.12
CLDND1-223ENST00000511081 FRMPD3Q5JV73 1810 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms