RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 SAMM50Q9Y512 469 aa16.63■□□□□ 0.25
USP38-202ENST00000510377 A0A0U1RQJ8 604 aa16.63■□□□□ 0.25
USP38-202ENST00000510377 MPHOSPH10O00566 681 aaKnown RBP16.63■□□□□ 0.25
USP38-202ENST00000510377 TFAP4Q01664 338 aa16.63■□□□□ 0.25
USP38-202ENST00000510377 NOA1Q8NC60 698 aaKnown RBP16.63■□□□□ 0.25
USP38-202ENST00000510377 PPM1EQ8WY54 764 aa16.63■□□□□ 0.25
USP38-202ENST00000510377 TBC1D7Q9P0N9 293 aa16.63■□□□□ 0.25
USP38-202ENST00000510377 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 KDM4FA0A1W2PPD8 638 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 SCG2P13521 617 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 TNNI2P48788 182 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 FUT8Q9BYC5 575 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.62■□□□□ 0.25
USP38-202ENST00000510377 GOLGA6L7A0A1B0GV03 622 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 H7C1D1 291 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 RAPGEF1Q13905 1077 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 KLHL7Q8IXQ5 586 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 PNKPQ96T60 521 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 TUBGCP2Q9BSJ2 902 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 CPDO75976 1380 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 ARID4AP29374 1257 aaPredicted RBP16.62■□□□□ 0.25
USP38-202ENST00000510377 CT47A1Q5JQC4 288 aaPredicted RBP16.62■□□□□ 0.25
USP38-202ENST00000510377 RAB34Q9BZG1 259 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 SLC39A2Q9NP94 309 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 MED4Q9NPJ6 270 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 HPSEQ9Y251 543 aa16.62■□□□□ 0.25
USP38-202ENST00000510377 H3BQF6 201 aa16.61■□□□□ 0.25
USP38-202ENST00000510377 TRAF5O00463 557 aa16.61■□□□□ 0.25
USP38-202ENST00000510377 NR1I3Q14994 352 aa16.61■□□□□ 0.25
USP38-202ENST00000510377 POLD4Q9HCU8 107 aa16.61■□□□□ 0.25
USP38-202ENST00000510377 GSG1L2A8MUP6 293 aa16.61■□□□□ 0.25
USP38-202ENST00000510377 NMT2O60551 498 aa16.61■□□□□ 0.25
USP38-202ENST00000510377 IRX3P78415 501 aaPredicted RBP16.61■□□□□ 0.25
USP38-202ENST00000510377 BLIDQ8IZY5 108 aa16.61■□□□□ 0.25
USP38-202ENST00000510377 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
USP38-202ENST00000510377 INPP5BP32019 993 aa16.61■□□□□ 0.25
USP38-202ENST00000510377 TCP11X2Q5H9J9 407 aa16.61■□□□□ 0.25
USP38-202ENST00000510377 CABP7Q86V35 215 aa16.61■□□□□ 0.25
USP38-202ENST00000510377 PP2D1A8MPX8 630 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 ERLIN2O94905 339 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 BAZ2BQ9UIF8 2168 aaKnown RBP16.6■□□□□ 0.25
USP38-202ENST00000510377 A0A1B0GTH6 734 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 TTC26A0AVF1 554 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 DNM2P50570 870 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 E2F4Q16254 413 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 SMIM23A6NLE4 172 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 CHRNDQ07001 517 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 TRMT1LQ7Z2T5 733 aaKnown RBP16.6■□□□□ 0.25
USP38-202ENST00000510377 FEZ2Q9UHY8 353 aaPredicted RBP16.6■□□□□ 0.25
USP38-202ENST00000510377 TECP42680 631 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 MICALCLQ6ZW33 695 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 SGMS1Q86VZ5 419 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 GIMAP7Q8NHV1 300 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 MAP3K14Q99558 947 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 EPB41L4AQ9HCS5 686 aaPredicted RBP16.6■□□□□ 0.25
USP38-202ENST00000510377 LRWD1Q9UFC0 647 aa16.6■□□□□ 0.25
USP38-202ENST00000510377 PRCPP42785 496 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 GNAQP50148 359 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 TOB1P50616 345 aaPredicted RBP16.59■□□□□ 0.25
USP38-202ENST00000510377 EIF6P56537 245 aaKnown RBP16.59■□□□□ 0.25
USP38-202ENST00000510377 ISCA1Q9BUE6 129 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 ADD3Q9UEY8 706 aaKnown RBP16.59■□□□□ 0.25
USP38-202ENST00000510377 SPATA31D1Q6ZQQ2 1576 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 CD44P16070 742 aaKnown RBP16.59■□□□□ 0.25
USP38-202ENST00000510377 NELFCDQ8IXH7 590 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 CNOT6LQ96LI5 555 aaKnown RBP16.59■□□□□ 0.25
USP38-202ENST00000510377 RIPOR2Q9Y4F9 1068 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 GYPCP04921 128 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 BMP6P22004 513 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 ZFYVE27Q5T4F4 411 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 SV2BQ7L1I2 683 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 INTS13Q9NVM9 706 aa16.59■□□□□ 0.25
USP38-202ENST00000510377 ATP1A1P05023 1023 aaKnown RBP16.58■□□□□ 0.25
USP38-202ENST00000510377 ZNF658Q5TYW1 1059 aaPredicted RBP16.58■□□□□ 0.25
USP38-202ENST00000510377 C6orf50Q9HD87 102 aa16.58■□□□□ 0.25
USP38-202ENST00000510377 RWDD2AQ9UIY3 292 aa16.58■□□□□ 0.25
USP38-202ENST00000510377 PPP2R5BQ15173 497 aa16.58■□□□□ 0.24
USP38-202ENST00000510377 CEP57Q86XR8 500 aa16.58■□□□□ 0.24
USP38-202ENST00000510377 PIGBQ92521 554 aa16.58■□□□□ 0.24
USP38-202ENST00000510377 CAPS2Q9BXY5 557 aa16.58■□□□□ 0.24
USP38-202ENST00000510377 TRIM31Q9BZY9 425 aa16.58■□□□□ 0.24
USP38-202ENST00000510377 ACTN4O43707 911 aaKnown RBP16.58■□□□□ 0.24
USP38-202ENST00000510377 CASP7P55210 303 aa16.58■□□□□ 0.24
USP38-202ENST00000510377 NUP58Q9BVL2 599 aa16.58■□□□□ 0.24
USP38-202ENST00000510377 TLDC2A0PJX2 215 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 ZNF185O15231 689 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 MOCS3O95396 460 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 RFC4P35249 363 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 KRT79Q5XKE5 535 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 ENAHQ8N8S7 591 aaPredicted RBP16.57■□□□□ 0.24
USP38-202ENST00000510377 TSGA10Q9BZW7 698 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 TMEM51Q9NW97 253 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 PEAK1Q9H792 1746 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 EIF3CLB5ME19 914 aaKnown RBP16.57■□□□□ 0.24
USP38-202ENST00000510377 ZNF579Q8NAF0 562 aaKnown RBP16.57■□□□□ 0.24
USP38-202ENST00000510377 EIF3CQ99613 913 aaKnown RBP16.57■□□□□ 0.24
USP38-202ENST00000510377 WDR19Q8NEZ3 1342 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 ZRANB2O95218 330 aaKnown RBP eCLIP16.57■□□□□ 0.24
USP38-202ENST00000510377 GGCXP38435 758 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms