RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 PPIL2Q13356 520 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
RFC1-211ENST00000509084 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
RFC1-211ENST00000509084 BTNL9Q6UXG8 535 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 CCDC84Q86UT8 332 aaPredicted RBP12.01□□□□□ -0.49
RFC1-211ENST00000509084 CCDC82Q8N4S0 544 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 FAM212AQ96EL1 285 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 C8orf76Q96K31 380 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 ALG1Q9BT22 464 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 RIOX1Q9H6W3 641 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 GPCPD1Q9NPB8 672 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.01□□□□□ -0.49
RFC1-211ENST00000509084 FEM1BQ9UK73 627 aa12.01□□□□□ -0.49
RFC1-211ENST00000509084 UTRNP46939 3433 aa12□□□□□ -0.49
RFC1-211ENST00000509084 MYH6P13533 1939 aa12□□□□□ -0.49
RFC1-211ENST00000509084 TRIM75PA6NK02 468 aa12□□□□□ -0.49
RFC1-211ENST00000509084 UBE2Q2LH0YL09 131 aa12□□□□□ -0.49
RFC1-211ENST00000509084 STX6O43752 255 aa12□□□□□ -0.49
RFC1-211ENST00000509084 FDX1P10109 184 aa12□□□□□ -0.49
RFC1-211ENST00000509084 SCG2P13521 617 aa12□□□□□ -0.49
RFC1-211ENST00000509084 NUBP1P53384 320 aa12□□□□□ -0.49
RFC1-211ENST00000509084 PFKFB3Q16875 520 aaPredicted RBP12□□□□□ -0.49
RFC1-211ENST00000509084 FAM83BQ5T0W9 1011 aa12□□□□□ -0.49
RFC1-211ENST00000509084 SYDE2Q5VT97 1194 aa12□□□□□ -0.49
RFC1-211ENST00000509084 MOB2Q70IA6 237 aa12□□□□□ -0.49
RFC1-211ENST00000509084 KCTD1Q719H9 257 aa12□□□□□ -0.49
RFC1-211ENST00000509084 SPICE1Q8N0Z3 855 aa12□□□□□ -0.49
RFC1-211ENST00000509084 CCDC12Q8WUD4 166 aaPredicted RBP12□□□□□ -0.49
RFC1-211ENST00000509084 OPTNQ96CV9 577 aa12□□□□□ -0.49
RFC1-211ENST00000509084 SLC10A4Q96EP9 437 aa12□□□□□ -0.49
RFC1-211ENST00000509084 OTUD5Q96G74 571 aa12□□□□□ -0.49
RFC1-211ENST00000509084 KCNH4Q9UQ05 1017 aa12□□□□□ -0.49
RFC1-211ENST00000509084 LOC285556D6RIA3 1793 aa12□□□□□ -0.49
RFC1-211ENST00000509084 TMEM232C9JQI7 657 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 CYTH3O43739 400 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 VCAM1P19320 739 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 FSTL1Q12841 308 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 RASGRP2Q7LDG7 609 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 CMTR1Q8N1G2 835 aaKnown RBP11.99□□□□□ -0.49
RFC1-211ENST00000509084 PROCA1Q8NCQ7 364 aaPredicted RBP11.99□□□□□ -0.49
RFC1-211ENST00000509084 CCDC148Q8NFR7 591 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 MTMR8Q96EF0 704 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 CLMNQ96JQ2 1002 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 UBA5Q9GZZ9 404 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 SH3GLB2Q9NR46 395 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 PNMA2Q9UL42 364 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 V9GY48 417 aaPredicted RBP11.99□□□□□ -0.49
RFC1-211ENST00000509084 MYPNQ86TC9 1320 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 PASKQ96RG2 1323 aa11.99□□□□□ -0.49
RFC1-211ENST00000509084 PTPRFP10586 1907 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 A0A0G2JLL6 359 aaPredicted RBP11.98□□□□□ -0.49
RFC1-211ENST00000509084 PNMA6FA0A0J9YX94 578 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 VPS37CA5D8V6 355 aaPredicted RBP11.98□□□□□ -0.49
RFC1-211ENST00000509084 ZBTB5O15062 677 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 BRD1O95696 1058 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 ZBTB48P10074 688 aaPredicted RBP11.98□□□□□ -0.49
RFC1-211ENST00000509084 HMGCS2P54868 508 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 PABPC4Q13310 644 aaKnown RBP eCLIP11.98□□□□□ -0.49
RFC1-211ENST00000509084 SNAPC2Q13487 334 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 SAFBQ15424 915 aaKnown RBP eCLIP11.98□□□□□ -0.49
RFC1-211ENST00000509084 PKN1Q16512 942 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 TTBK2Q6IQ55 1244 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 PPP1R18Q6NYC8 613 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 FASTKD5Q7L8L6 764 aaKnown RBP11.98□□□□□ -0.49
RFC1-211ENST00000509084 PRRT2Q7Z6L0 340 aaPredicted RBP11.98□□□□□ -0.49
RFC1-211ENST00000509084 HOMER1Q86YM7 354 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 ADGRF4Q8IZF3 695 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 FBXO18Q8NFZ0 1043 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 NUP88Q99567 741 aaPredicted RBP11.98□□□□□ -0.49
RFC1-211ENST00000509084 TANGO6Q9C0B7 1094 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
RFC1-211ENST00000509084 JMJD4Q9H9V9 463 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 BRMS1Q9HCU9 246 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 ATP6V1DQ9Y5K8 247 aa11.98□□□□□ -0.49
RFC1-211ENST00000509084 USP17L15C9J2P7 530 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 USP17L13C9JLJ4 530 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 USP17L11C9JVI0 530 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 USP17L18D6R9N7 530 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 USP17L22D6RA61 530 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 USP17L17D6RBQ6 530 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 USP17L19D6RCP7 530 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 USP17L20D6RJB6 530 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 IRF6O14896 467 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 ZSCAN22P10073 491 aaPredicted RBP11.97□□□□□ -0.49
RFC1-211ENST00000509084 CALML3P27482 149 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 SLC16A2P36021 539 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 HUNKP57058 714 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 FMR1Q06787 632 aaKnown RBP eCLIP11.97□□□□□ -0.49
RFC1-211ENST00000509084 USP17L24Q0WX57 530 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 KIAA1755Q5JYT7 1200 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 CST9Q5W186 159 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 GALNT17Q6IS24 598 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 TEX2Q8IWB9 1127 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 PRPF38AQ8NAV1 312 aaKnown RBP11.97□□□□□ -0.49
RFC1-211ENST00000509084 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 PIGSQ96S52 555 aa11.97□□□□□ -0.49
RFC1-211ENST00000509084 SLF1Q9BQI6 1058 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms