RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 BTNL9Q6UXG8 535 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 SMC1BQ8NDV3 1235 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 C12orf42Q96LP6 360 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 JMJD4Q9H9V9 463 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 SEC63Q9UGP8 760 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 MTMR6Q9Y217 621 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 PASKQ96RG2 1323 aa17.15■□□□□ 0.34
SNCAIP-211ENST00000509023 PDIA4P13667 645 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-211ENST00000509023 GUCY1B3Q02153 619 aa17.14■□□□□ 0.33
SNCAIP-211ENST00000509023 PPIL2Q13356 520 aa17.14■□□□□ 0.33
SNCAIP-211ENST00000509023 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-211ENST00000509023 OTUD7BQ6GQQ9 843 aa17.14■□□□□ 0.33
SNCAIP-211ENST00000509023 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-211ENST00000509023 SLC10A4Q96EP9 437 aa17.14■□□□□ 0.33
SNCAIP-211ENST00000509023 TMOD4Q9NZQ9 345 aa17.14■□□□□ 0.33
SNCAIP-211ENST00000509023 WDR33Q9C0J8 1336 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-211ENST00000509023 SH3D19Q5HYK7 790 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 SYDE2Q5VT97 1194 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 FBXO18Q8NFZ0 1043 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 RPAP3Q9H6T3 665 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 FEM1BQ9UK73 627 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 PTPRFP10586 1907 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 TRIM29Q14134 588 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 CHURC1Q8WUH1 139 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 GPKOWQ92917 476 aaPredicted RBP eCLIP17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 MTMR8Q96EF0 704 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 TANGO6Q9C0B7 1094 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 VPS54Q9P1Q0 977 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 PRR12Q9ULL5 1215 aa17.13■□□□□ 0.33
SNCAIP-211ENST00000509023 PLA2G6O60733 806 aa17.12■□□□□ 0.33
SNCAIP-211ENST00000509023 TOMM70O94826 608 aa17.12■□□□□ 0.33
SNCAIP-211ENST00000509023 ZSCAN22P10073 491 aaPredicted RBP17.12■□□□□ 0.33
SNCAIP-211ENST00000509023 XBP1P17861 261 aa17.12■□□□□ 0.33
SNCAIP-211ENST00000509023 GJA5P36382 358 aa17.12■□□□□ 0.33
SNCAIP-211ENST00000509023 KRT40Q6A162 431 aa17.12■□□□□ 0.33
SNCAIP-211ENST00000509023 FAM160B2Q86V87 743 aa17.12■□□□□ 0.33
SNCAIP-211ENST00000509023 KIFC2Q96AC6 838 aa17.12■□□□□ 0.33
SNCAIP-211ENST00000509023 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
SNCAIP-211ENST00000509023 KCNH4Q9UQ05 1017 aa17.12■□□□□ 0.33
SNCAIP-211ENST00000509023 A0A0G2JLL6 359 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 CXCL11O14625 94 aa17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 ZBTB5O15062 677 aa17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 WWC2Q6AWC2 1192 aa17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 SAMD1Q6SPF0 538 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 HEATR3Q7Z4Q2 680 aa17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 PRRT2Q7Z6L0 340 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 ZNF784Q8NCA9 323 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 SHISA4Q96DD7 197 aa17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 PNMA6FA0A0J9YX94 578 aa17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 HUNKP57058 714 aa17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 SNAP25P60880 206 aa17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 RGS22Q8NE09 1264 aa17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 KCNJ14Q9UNX9 436 aa17.11■□□□□ 0.33
SNCAIP-211ENST00000509023 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
SNCAIP-211ENST00000509023 FLOT1O75955 427 aa17.1■□□□□ 0.33
SNCAIP-211ENST00000509023 F13A1P00488 732 aa17.1■□□□□ 0.33
SNCAIP-211ENST00000509023 QRICH1Q2TAL8 776 aa17.1■□□□□ 0.33
SNCAIP-211ENST00000509023 WNK4Q96J92 1243 aa17.1■□□□□ 0.33
SNCAIP-211ENST00000509023 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
SNCAIP-211ENST00000509023 BARHL2Q9NY43 387 aa17.1■□□□□ 0.33
SNCAIP-211ENST00000509023 STXBP3O00186 592 aa17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 GADL1Q6ZQY3 521 aa17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 FERMT3Q86UX7 667 aa17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 PPP1R11O60927 126 aaPredicted RBP17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 MMP1P03956 469 aa17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 TREML2Q5T2D2 321 aa17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 TYW1BQ6NUM6 668 aa17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 PRPF38AQ8NAV1 312 aaKnown RBP17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 PROCA1Q8NCQ7 364 aaPredicted RBP17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 TNPO1Q92973 898 aaKnown RBP17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 SH3GLB2Q9NR46 395 aa17.09■□□□□ 0.33
SNCAIP-211ENST00000509023 hCG_1984214I3L0E3 225 aa17.08■□□□□ 0.33
SNCAIP-211ENST00000509023 SNAPC2Q13487 334 aa17.08■□□□□ 0.33
SNCAIP-211ENST00000509023 CATSPERGQ6ZRH7 1159 aa17.08■□□□□ 0.33
SNCAIP-211ENST00000509023 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.33
SNCAIP-211ENST00000509023 ZNF713Q8N859 430 aaPredicted RBP17.08■□□□□ 0.33
SNCAIP-211ENST00000509023 COA7Q96BR5 231 aa17.08■□□□□ 0.33
SNCAIP-211ENST00000509023 RANBP17Q9H2T7 1088 aaKnown RBP17.08■□□□□ 0.33
SNCAIP-211ENST00000509023 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.33
SNCAIP-211ENST00000509023 PARP14Q460N5 1801 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 USP17L15C9J2P7 530 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 USP17L13C9JLJ4 530 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 USP17L11C9JVI0 530 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 USP17L18D6R9N7 530 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 USP17L22D6RA61 530 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 USP17L17D6RBQ6 530 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 USP17L19D6RCP7 530 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 USP17L20D6RJB6 530 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 NAPAP54920 295 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 NLRP5P59047 1200 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 USP17L24Q0WX57 530 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 MKRN3Q13064 507 aaKnown RBP17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 CCDC148Q8NFR7 591 aa17.08■□□□□ 0.32
SNCAIP-211ENST00000509023 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
SNCAIP-211ENST00000509023 RESTQ13127 1097 aa17.07■□□□□ 0.32
SNCAIP-211ENST00000509023 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNCAIP-211ENST00000509023 SPRYD7Q5W111 196 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms