RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 CHURC1Q8WUH1 139 aa12.6□□□□□ -0.39
POLR2J3-214ENST00000508910 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
POLR2J3-214ENST00000508910 OPTNQ96CV9 577 aa12.6□□□□□ -0.39
POLR2J3-214ENST00000508910 C8orf76Q96K31 380 aa12.6□□□□□ -0.39
POLR2J3-214ENST00000508910 CPVLQ9H3G5 476 aa12.6□□□□□ -0.39
POLR2J3-214ENST00000508910 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-214ENST00000508910 FEM1BQ9UK73 627 aa12.6□□□□□ -0.39
POLR2J3-214ENST00000508910 KCNH4Q9UQ05 1017 aa12.6□□□□□ -0.39
POLR2J3-214ENST00000508910 A0A0G2JLL6 359 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 hCG_1642624A0A1W2PR95 340 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 VPS37CA5D8V6 355 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 H3BQV1 296 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 hCG_1984214I3L0E3 225 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 IRF6O14896 467 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 XBP1P17861 261 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 SLC16A2P36021 539 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 PKN1Q16512 942 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 PRRT2Q7Z6L0 340 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 HOMER1Q86YM7 354 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 FAM177A1Q8N128 213 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 ZNF713Q8N859 430 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 MTMR8Q96EF0 704 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 AIFM3Q96NN9 605 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 TANGO6Q9C0B7 1094 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 RPAP3Q9H6T3 665 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 JMJD4Q9H9V9 463 aa12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
POLR2J3-214ENST00000508910 PARP14Q460N5 1801 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 ZBTB5O15062 677 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 BRD1O95696 1058 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 FOSBP53539 338 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 HUNKP57058 714 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 FSTL1Q12841 308 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 DGKZQ13574 1117 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 PKP1Q13835 747 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 ZNF784Q8NCA9 323 aaPredicted RBP12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 PROCA1Q8NCQ7 364 aaPredicted RBP12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 FBXO18Q8NFZ0 1043 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 PIBF1Q8WXW3 757 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 WNK4Q96J92 1243 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 PIGSQ96S52 555 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 SLF1Q9BQI6 1058 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 VAT1LQ9HCJ6 419 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 SH3GLB2Q9NR46 395 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 PRR12Q9ULL5 1215 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 MTMR6Q9Y217 621 aa12.58□□□□□ -0.4
POLR2J3-214ENST00000508910 PNMA6FA0A0J9YX94 578 aa12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 ZSCAN22P10073 491 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 ZBTB48P10074 688 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 GJA5P36382 358 aa12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 SNAPC2Q13487 334 aa12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 CDC37Q16543 378 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 KRT40Q6A162 431 aa12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 WWC2Q6AWC2 1192 aa12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 HEATR3Q7Z4Q2 680 aa12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 CCDC148Q8NFR7 591 aa12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 CCDC12Q8WUD4 166 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 KIFC2Q96AC6 838 aa12.57□□□□□ -0.4
POLR2J3-214ENST00000508910 USP17L15C9J2P7 530 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 USP17L13C9JLJ4 530 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 USP17L11C9JVI0 530 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 USP17L18D6R9N7 530 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 USP17L22D6RA61 530 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 USP17L17D6RBQ6 530 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 USP17L19D6RCP7 530 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 USP17L20D6RJB6 530 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 STXBP3O00186 592 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 FLOT1O75955 427 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 GTF2A2P52657 109 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 GUCY1B3Q02153 619 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 TRAF1Q13077 416 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 QRICH1Q2TAL8 776 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 GADL1Q6ZQY3 521 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 FASTKD5Q7L8L6 764 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 PRPF38AQ8NAV1 312 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 GPKOWQ92917 476 aaPredicted RBP eCLIP12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 RANBP17Q9H2T7 1088 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 FBXO28Q9NVF7 368 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 BARHL2Q9NY43 387 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 VPS54Q9P1Q0 977 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 PPP1R9AQ9ULJ8 1098 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 ZDHHC9Q9Y397 364 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 MYPNQ86TC9 1320 aa12.56□□□□□ -0.4
POLR2J3-214ENST00000508910 A0A0G2JMZ2 1700 aa12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 F13A1P00488 732 aa12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 MMP1P03956 469 aa12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 FDX1P10109 184 aa12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 CETPP11597 493 aa12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 CALML3P27482 149 aa12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 NAPAP54920 295 aa12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 PABPC4Q13310 644 aaKnown RBP eCLIP12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 SAFBQ15424 915 aaKnown RBP eCLIP12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 SPRYD7Q5W111 196 aa12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 OTUD7BQ6GQQ9 843 aa12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
POLR2J3-214ENST00000508910 SAPCD2Q86UD0 394 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms