RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 BLOC1S2Q6QNY1 142 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 NFXL1Q6ZNB6 911 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 SHCBP1Q8NEM2 672 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 KIFC2Q96AC6 838 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 JAKMIP1Q96N16 626 aaKnown RBP10.68□□□□□ -0.7
NUP54-207ENST00000508583 MAP3K14Q99558 947 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 NUP88Q99567 741 aaPredicted RBP10.68□□□□□ -0.7
NUP54-207ENST00000508583 TEX13BQ9BXU2 312 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 SPATC1LQ9H0A9 340 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 MROH8Q9H579 483 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 ADAMTS5Q9UNA0 930 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
NUP54-207ENST00000508583 A0A0G2JMZ2 1700 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 ATP2A1O14983 1001 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 ECM2O94769 699 aaPredicted RBP10.67□□□□□ -0.7
NUP54-207ENST00000508583 GNAQP50148 359 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 TRAF1Q13077 416 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 PLS1Q14651 629 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 FBXO46Q6PJ61 603 aaPredicted RBP10.67□□□□□ -0.7
NUP54-207ENST00000508583 BTNL9Q6UXG8 535 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 KCTD1Q719H9 257 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 OTOP1Q7RTM1 612 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 IGDCC4Q8TDY8 1250 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 ATG4CQ96DT6 458 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 FBXO28Q9NVF7 368 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 SLC5A4Q9NY91 659 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 RBPJLQ9UBG7 517 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 SNX14Q9Y5W7 946 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 SLC12A7Q9Y666 1083 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 TAF6LQ9Y6J9 622 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 PARP14Q460N5 1801 aa10.67□□□□□ -0.7
NUP54-207ENST00000508583 MGAMO43451 1857 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
NUP54-207ENST00000508583 STRNO43815 780 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 STAT3P40763 770 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 RCAN1P53805 252 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 CAP1Q01518 475 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 TKFCQ3LXA3 575 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 SYDE2Q5VT97 1194 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 WDR78Q5VTH9 848 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 CHST3Q7LGC8 479 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 PLEKHH3Q7Z736 793 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 NBPF11Q86T75 865 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 SGMS1Q86VZ5 419 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 TRMT44Q8IYL2 757 aaKnown RBP10.66□□□□□ -0.7
NUP54-207ENST00000508583 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 CTCFLQ8NI51 663 aaPredicted RBP10.66□□□□□ -0.7
NUP54-207ENST00000508583 RAET1EQ8TD07 263 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 TRIM47Q96LD4 638 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 LZTS2Q9BRK4 669 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 TM6SF1Q9BZW5 370 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 LY9Q9HBG7 655 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 SLC38A10Q9HBR0 1119 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 TXNRD2Q9NNW7 524 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 SRRDQ9UH36 339 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 FBXO40Q9UH90 709 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 CYP46A1Q9Y6A2 500 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 RLFQ13129 1914 aa10.66□□□□□ -0.7
NUP54-207ENST00000508583 FRMPD2Q68DX3 1309 aaPredicted RBP10.65□□□□□ -0.7
NUP54-207ENST00000508583 DHX16O60231 1041 aaKnown RBP10.65□□□□□ -0.7
NUP54-207ENST00000508583 CASTP20810 708 aaKnown RBP10.65□□□□□ -0.7
NUP54-207ENST00000508583 ANTXR2P58335 489 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 TMEM132BQ14DG7 1078 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 PPP2R5BQ15173 497 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 LHX8Q68G74 356 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 GPR142Q7Z601 462 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 NCAPG2Q86XI2 1143 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 RIOX2Q8IUF8 465 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 ZNF654Q8IZM8 581 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 TNS4Q8IZW8 715 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 ABRAQ8N0Z2 381 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 FBXL16Q8N461 479 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 IL27Q8NEV9 243 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 NKX2-3Q8TAU0 364 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 NUDT12Q9BQG2 462 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 ARHGAP39Q9C0H5 1083 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 BTBD7Q9P203 1132 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 PRR12Q9ULL5 1215 aa10.65□□□□□ -0.7
NUP54-207ENST00000508583 CCDC196A0A1B0GTZ2 297 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 SLC15A5A6NIM6 579 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 PEX10O60683 326 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 CNMDO75829 334 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 ICAM1P05362 532 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 FCER1AP12319 257 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 ERCC3P19447 782 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 RPS6KB1P23443 525 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 RGS2P41220 211 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 EXOSC10Q01780 885 aaKnown RBP10.64□□□□□ -0.71
NUP54-207ENST00000508583 TROAPQ12815 778 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 IRF5Q13568 498 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 GRM4Q14833 912 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 Q3C1V9 767 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 ADCK5Q3MIX3 580 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 C8orf34Q49A92 452 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 SNRNP48Q6IEG0 339 aaKnown RBP10.64□□□□□ -0.71
NUP54-207ENST00000508583 RUFY3Q7L099 469 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 SLAIN1Q8ND83 568 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 CHST13Q8NET6 341 aa10.64□□□□□ -0.71
NUP54-207ENST00000508583 NUP133Q8WUM0 1156 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms