RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 DEFB118Q96PH6 123 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 RAVER2Q9HCJ3 691 aaKnown RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 STARD7Q9NQZ5 370 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 ANAPC4Q9UJX5 808 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 SUGT1Q9Y2Z0 365 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 CCDC196A0A1B0GTZ2 297 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 TTLL1O95922 423 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 ZAP70P43403 619 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 GCLCP48506 637 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-208ENST00000508342 SPP2Q13103 211 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 TSPYL6Q8N831 410 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 NCOA7Q8NI08 942 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 CDCA7LQ96GN5 454 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 FAM184BQ9ULE4 1060 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 MROH7-TTC4A0A0A0MT08 1334 aa3.35□□□□□ -1.87
NEDD4-208ENST00000508342 TMEM265A0A087WTH1 108 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 CIAO1O76071 339 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 MX1P20591 662 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 VAMP1P23763 118 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 MARK3P27448 753 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 TM4SF1P30408 202 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 GBP2P32456 591 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SLFN5Q08AF3 891 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 PPP2R5BQ15173 497 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 CCDC102BQ68D86 513 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 DEFB128Q7Z7B8 93 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 IFNL1Q8IU54 200 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 ZNF34Q8IZ26 560 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 NLRP7Q8WX94 980 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 MYH2Q9UKX2 1941 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SCN7AQ01118 1682 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 TMEM232C9JQI7 657 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 KINO60870 393 aaKnown RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 AMHP03971 560 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 MARCKSP29966 332 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 DYNLL1P63167 89 aaKnown RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 PPIL2Q13356 520 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SYDE2Q5VT97 1194 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 FAM117BQ6P1L5 589 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 TBC1D9Q6ZT07 1266 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SCYL3Q8IZE3 742 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SLC17A8Q8NDX2 589 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 C6orf50Q9HD87 102 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 ZNF69Q9UC07 566 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 LZTS1Q9Y250 596 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SCN4AP35499 1836 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 COL5A3P25940 1745 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 C10orf71Q711Q0 1435 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 NAV1Q8NEY1 1877 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 FARP2O94887 1054 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 GH2P01242 217 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 EIF5P55010 431 aaKnown RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 NBPF12Q5TAG4 269 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SNRNP48Q6IEG0 339 aaKnown RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SYCP3Q8IZU3 236 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SDR42E1Q8WUS8 393 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 IPO9Q96P70 1041 aaKnown RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 YME1L1Q96TA2 773 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 CDHR2Q9BYE9 1310 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 ASB14A6NK59 587 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 M0R2C6 588 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 CTNND1O60716 968 aaKnown RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 ADORA1P30542 326 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 MAN1A1P33908 653 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 VGLL4Q14135 290 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SMC1AQ14683 1233 aaKnown RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 STK38Q15208 465 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 MCMDC2Q4G0Z9 681 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 KIAA1841Q6NSI8 718 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 STXBP4Q6ZWJ1 553 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 RPAP2Q8IXW5 612 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 CXorf38Q8TB03 319 aa3.34□□□□□ -1.87
NEDD4-208ENST00000508342 SREK1Q8WXA9 508 aaKnown RBP3.34□□□□□ -1.87
NEDD4-208ENST00000508342 KIF20AO95235 890 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 PRELPP51888 382 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 TTLL4Q14679 1199 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 ANKRD1Q15327 319 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 ABHD8Q96I13 439 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 CHAMP1Q96JM3 812 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 RPS6KC1Q96S38 1066 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 PPP1R16BQ96T49 567 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 PUS3Q9BZE2 481 aaKnown RBP3.34□□□□□ -1.88
NEDD4-208ENST00000508342 NACA2Q9H009 215 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 POLIQ9UNA4 740 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 DDX49Q9Y6V7 483 aaKnown RBP3.34□□□□□ -1.88
NEDD4-208ENST00000508342 MYH7P12883 1935 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 DDX11L8A8MPP1 907 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 VIL1P09327 827 aaKnown RBP3.34□□□□□ -1.88
NEDD4-208ENST00000508342 PYGBP11216 843 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 SYN1P17600 705 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 CTNNA2P26232 953 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 TMOD1P28289 359 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 PPP2R2DQ66LE6 453 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 CEP131Q9UPN4 1083 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 HCN4Q9Y3Q4 1203 aa3.34□□□□□ -1.88
NEDD4-208ENST00000508342 TJP1Q07157 1748 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 CASZ1Q86V15 1759 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 STX6O43752 255 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PPFIA3O75145 1194 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms