RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ITGA4P13612 1032 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 GRIA2P42262 883 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 CTSKP43235 329 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 PPP2R2AP63151 447 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 CYP27A1Q02318 531 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 YOD1Q5VVQ6 348 aaPredicted RBP5.15□□□□□ -1.59
LSM6-205ENST00000507449 ADAT2Q7Z6V5 191 aaKnown RBP5.15□□□□□ -1.59
LSM6-205ENST00000507449 ARHGEF39Q8N4T4 335 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 ZBTB38Q8NAP3 1195 aaPredicted RBP5.15□□□□□ -1.59
LSM6-205ENST00000507449 LRRN4CLQ8ND94 238 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 BVESQ8NE79 360 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 SYTL5Q8TDW5 730 aaPredicted RBP5.15□□□□□ -1.59
LSM6-205ENST00000507449 SGSM3Q96HU1 749 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 RCC1LQ96I51 464 aaKnown RBP5.15□□□□□ -1.59
LSM6-205ENST00000507449 HDAC8Q9BY41 377 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 GBP3Q9H0R5 595 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 DUSP15Q9H1R2 295 aaPredicted RBP5.15□□□□□ -1.59
LSM6-205ENST00000507449 FANCLQ9NW38 375 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 PRR13Q9NZ81 148 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 CGGBP1Q9UFW8 167 aaPredicted RBP5.15□□□□□ -1.59
LSM6-205ENST00000507449 EMC9Q9Y3B6 208 aa5.15□□□□□ -1.59
LSM6-205ENST00000507449 A0A087WZG4 1122 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 PPM1BO75688 479 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 NAT2P11245 290 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 ITIH2P19823 946 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 CYP4F3Q08477 520 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 NMIQ13287 307 aaPredicted RBP5.14□□□□□ -1.59
LSM6-205ENST00000507449 DUSP27Q5VZP5 1158 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 TRIM59Q8IWR1 403 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 LRRC47Q8N1G4 583 aaKnown RBP5.14□□□□□ -1.59
LSM6-205ENST00000507449 FIBCD1Q8N539 461 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 EXOC2Q96KP1 924 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 OSBPL1AQ9BXW6 950 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 KRTAP17-1Q9BYP8 105 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 GPR62Q9BZJ7 368 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 NOL6Q9H6R4 1146 aaKnown RBP5.14□□□□□ -1.59
LSM6-205ENST00000507449 LRRC4CQ9HCJ2 640 aa5.14□□□□□ -1.59
LSM6-205ENST00000507449 IQCA1LA6NCM1 817 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 GNAT3A8MTJ3 354 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 H0Y8X5 98 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 CEACAM5P06731 702 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 HSD3B2P26439 372 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 PPP2R5DQ14738 602 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 TKFCQ3LXA3 575 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 PLEKHG4Q58EX7 1191 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 PLD6Q8N2A8 252 aaKnown RBP5.13□□□□□ -1.59
LSM6-205ENST00000507449 PIWIL2Q8TC59 973 aaKnown RBP5.13□□□□□ -1.59
LSM6-205ENST00000507449 BTN2A2Q8WVV5 523 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 PPP1R14AQ96A00 147 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 MCMBPQ9BTE3 642 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 METTL22Q9BUU2 404 aaPredicted RBP5.13□□□□□ -1.59
LSM6-205ENST00000507449 MKNK2Q9HBH9 465 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 CHST7Q9NS84 486 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 ATG3Q9NT62 314 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 KCNH3Q9ULD8 1083 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 AKT3Q9Y243 479 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 SUGT1Q9Y2Z0 365 aa5.13□□□□□ -1.59
LSM6-205ENST00000507449 MEIS1O00470 390 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 GSC2O15499 205 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 VAMP4O75379 141 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 CDC45O75419 566 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 KCNH1O95259 989 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 HOXA10P31260 410 aaPredicted RBP5.12□□□□□ -1.59
LSM6-205ENST00000507449 SSTR4P31391 388 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 L1CAMP32004 1257 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 GP2P55259 537 aaKnown RBP5.12□□□□□ -1.59
LSM6-205ENST00000507449 SF1Q15637 639 aaKnown RBP5.12□□□□□ -1.59
LSM6-205ENST00000507449 CPSF6Q16630 551 aaKnown RBP eCLIP5.12□□□□□ -1.59
LSM6-205ENST00000507449 LONRF2Q1L5Z9 754 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 TMEM67Q5HYA8 995 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 FAM209AQ5JX71 171 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 NOL9Q5SY16 702 aaKnown RBP5.12□□□□□ -1.59
LSM6-205ENST00000507449 CDKAL1Q5VV42 579 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 CRTC3Q6UUV7 619 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 KIAA0907Q7Z7F0 614 aaPredicted RBP5.12□□□□□ -1.59
LSM6-205ENST00000507449 APPBP2Q92624 585 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 KISS1RQ969F8 398 aaPredicted RBP5.12□□□□□ -1.59
LSM6-205ENST00000507449 OSBP2Q969R2 916 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 HSPA12BQ96MM6 686 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 ZDHHC15Q96MV8 337 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 AARSD1Q9BTE6 412 aaKnown RBP5.12□□□□□ -1.59
LSM6-205ENST00000507449 SEMA3GQ9NS98 782 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 LRP2BPQ9P2M1 347 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 ZC3H7BQ9UGR2 993 aaKnown RBP5.12□□□□□ -1.59
LSM6-205ENST00000507449 DIS3Q9Y2L1 958 aaKnown RBP5.12□□□□□ -1.59
LSM6-205ENST00000507449 SBNO2Q9Y2G9 1366 aa5.12□□□□□ -1.59
LSM6-205ENST00000507449 TRAV20A0A0B4J274 112 aa5.11□□□□□ -1.59
LSM6-205ENST00000507449 FAM155AB1AL88 458 aaPredicted RBP5.11□□□□□ -1.59
LSM6-205ENST00000507449 H3BS24 57 aa5.11□□□□□ -1.59
LSM6-205ENST00000507449 AGRPO00253 132 aa5.11□□□□□ -1.59
LSM6-205ENST00000507449 PPP1R12AO14974 1030 aaPredicted RBP5.11□□□□□ -1.59
LSM6-205ENST00000507449 TGFB1P01137 390 aa5.11□□□□□ -1.59
LSM6-205ENST00000507449 GRB10Q13322 594 aa5.11□□□□□ -1.59
LSM6-205ENST00000507449 HSP90AA2PQ14568 343 aaPredicted RBP5.11□□□□□ -1.59
LSM6-205ENST00000507449 GAB4Q2WGN9 574 aa5.11□□□□□ -1.59
LSM6-205ENST00000507449 GTF2IRD2BQ6EKJ0 949 aa5.11□□□□□ -1.59
LSM6-205ENST00000507449 GTF2IRD2Q86UP8 949 aa5.11□□□□□ -1.59
LSM6-205ENST00000507449 TSPYL5Q86VY4 417 aaPredicted RBP5.11□□□□□ -1.59
LSM6-205ENST00000507449 HOMER1Q86YM7 354 aa5.11□□□□□ -1.59
LSM6-205ENST00000507449 DAGLBQ8NCG7 672 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms