RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TTYH3Q9C0H2 523 aa19.91■□□□□ 0.78
NUP54-205ENST00000507257 ANAPC4Q9UJX5 808 aa19.91■□□□□ 0.78
NUP54-205ENST00000507257 ENC1O14682 589 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 EIF3HO15372 352 aaKnown RBP eCLIP19.9■□□□□ 0.78
NUP54-205ENST00000507257 MYL1P05976 194 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 DNM2P50570 870 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 SKOR1P84550 965 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 KIF6Q6ZMV9 814 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 ADSSL1Q8N142 457 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 MAGEB6Q8N7X4 407 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 SPATA5Q8NB90 893 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 IQCDQ96DY2 449 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 MTRQ99707 1265 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 UBAC1Q9BSL1 405 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 GREM2Q9H772 168 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 KAT14Q9H8E8 782 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 OPA1O60313 960 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 ERLIN2O94905 339 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 RPN1P04843 607 aaKnown RBP19.9■□□□□ 0.78
NUP54-205ENST00000507257 KCNB1Q14721 858 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 ARL6IP4Q66PJ3 421 aaKnown RBP19.9■□□□□ 0.78
NUP54-205ENST00000507257 KIAA1328Q86T90 577 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 ARMT1Q9H993 441 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 VPS54Q9P1Q0 977 aa19.9■□□□□ 0.78
NUP54-205ENST00000507257 MROH5Q6ZUA9 1318 aa19.89■□□□□ 0.77
NUP54-205ENST00000507257 TNFRSF8P28908 595 aa19.89■□□□□ 0.77
NUP54-205ENST00000507257 TDO2P48775 406 aa19.89■□□□□ 0.77
NUP54-205ENST00000507257 PTGDRQ13258 359 aa19.89■□□□□ 0.77
NUP54-205ENST00000507257 NPY5RQ15761 445 aa19.89■□□□□ 0.77
NUP54-205ENST00000507257 SPATS2Q86XZ4 545 aaKnown RBP19.89■□□□□ 0.77
NUP54-205ENST00000507257 NUP133Q8WUM0 1156 aa19.89■□□□□ 0.77
NUP54-205ENST00000507257 CAPS2Q9BXY5 557 aa19.89■□□□□ 0.77
NUP54-205ENST00000507257 GRIN2DO15399 1336 aa19.89■□□□□ 0.77
NUP54-205ENST00000507257 RREB1Q92766 1687 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 SHTN1A0MZ66 631 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 IPO7O95373 1038 aaKnown RBP19.88■□□□□ 0.77
NUP54-205ENST00000507257 SRGNP10124 158 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 USP8P40818 1118 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 FIGNQ5HY92 759 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 ALS2CLQ60I27 953 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 CMTR1Q8N1G2 835 aaKnown RBP19.88■□□□□ 0.77
NUP54-205ENST00000507257 CCDC82Q8N4S0 544 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 RIN2Q8WYP3 895 aaPredicted RBP19.88■□□□□ 0.77
NUP54-205ENST00000507257 CCDC85AQ96PX6 553 aaPredicted RBP19.88■□□□□ 0.77
NUP54-205ENST00000507257 MYCBPQ99417 103 aaPredicted RBP19.88■□□□□ 0.77
NUP54-205ENST00000507257 ZKSCAN3Q9BRR0 538 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 FAM169AQ9Y6X4 670 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 CALM1P0DP23 149 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 CALM2P0DP24 149 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 CALM3P0DP25 149 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 MYBL2P10244 700 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 LONP1P36776 959 aaKnown RBP19.88■□□□□ 0.77
NUP54-205ENST00000507257 PRCPP42785 496 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 RRP12Q5JTH9 1297 aaKnown RBP19.88■□□□□ 0.77
NUP54-205ENST00000507257 GIGYF2Q6Y7W6 1299 aaKnown RBP19.88■□□□□ 0.77
NUP54-205ENST00000507257 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
NUP54-205ENST00000507257 CAGE1Q8TC20 777 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 ESR2Q92731 530 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 BLZF1Q9H2G9 400 aa19.88■□□□□ 0.77
NUP54-205ENST00000507257 ZNHIT6Q9NWK9 470 aaKnown RBP19.88■□□□□ 0.77
NUP54-205ENST00000507257 PDE2AO00408 941 aaPredicted RBP19.87■□□□□ 0.77
NUP54-205ENST00000507257 WNT7AO00755 349 aa19.87■□□□□ 0.77
NUP54-205ENST00000507257 SRGAP2O75044 1071 aa19.87■□□□□ 0.77
NUP54-205ENST00000507257 ZBED6P86452 979 aa19.87■□□□□ 0.77
NUP54-205ENST00000507257 ZNF174Q15697 407 aa19.87■□□□□ 0.77
NUP54-205ENST00000507257 EMBQ6PCB8 327 aa19.87■□□□□ 0.77
NUP54-205ENST00000507257 MICALL1Q8N3F8 863 aa19.87■□□□□ 0.77
NUP54-205ENST00000507257 TRIM58Q8NG06 486 aa19.87■□□□□ 0.77
NUP54-205ENST00000507257 GNL3LQ9NVN8 582 aaKnown RBP19.87■□□□□ 0.77
NUP54-205ENST00000507257 TNKSO95271 1327 aa19.87■□□□□ 0.77
NUP54-205ENST00000507257 A0A1W2PQJ5 194 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 ZEB2O60315 1214 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 CCT5P48643 541 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 VAV2P52735 878 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 PPARAQ07869 468 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 NNTQ13423 1086 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 NLRP10Q86W26 655 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 CAVIN3Q969G5 261 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 PLEKHA4Q9H4M7 779 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 SNX12Q9UMY4 172 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 SLC4A4Q9Y6R1 1079 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 PCP11498 1178 aaKnown RBP19.86■□□□□ 0.77
NUP54-205ENST00000507257 CREG2Q8IUH2 290 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 LCORLQ8N3X6 602 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 CAPZA3Q96KX2 299 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 PAGR1Q9BTK6 254 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 TOMM22Q9NS69 142 aa19.86■□□□□ 0.77
NUP54-205ENST00000507257 RNF216Q9NWF9 866 aaPredicted RBP19.86■□□□□ 0.77
NUP54-205ENST00000507257 SPATA31A3Q5VYP0 1347 aa19.85■□□□□ 0.77
NUP54-205ENST00000507257 DDAH1O94760 285 aa19.85■□□□□ 0.77
NUP54-205ENST00000507257 SLC5A1P13866 664 aa19.85■□□□□ 0.77
NUP54-205ENST00000507257 IDEP14735 1019 aa19.85■□□□□ 0.77
NUP54-205ENST00000507257 EPHB4P54760 987 aa19.85■□□□□ 0.77
NUP54-205ENST00000507257 EMC10Q5UCC4 262 aa19.85■□□□□ 0.77
NUP54-205ENST00000507257 B4GALNT4Q76KP1 1039 aa19.85■□□□□ 0.77
NUP54-205ENST00000507257 CCDC91Q7Z6B0 441 aa19.85■□□□□ 0.77
NUP54-205ENST00000507257 STAMQ92783 540 aa19.85■□□□□ 0.77
NUP54-205ENST00000507257 LACRTQ9GZZ8 138 aa19.85■□□□□ 0.77
NUP54-205ENST00000507257 NHEJ1Q9H9Q4 299 aaPredicted RBP19.85■□□□□ 0.77
NUP54-205ENST00000507257 SHANK3Q9BYB0 1731 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms