RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 LRP2BPQ9P2M1 347 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 FZD1Q9UP38 647 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 SUGT1Q9Y2Z0 365 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 DAGLAQ9Y4D2 1042 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 MAST3O60307 1309 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 PITPNM2Q9BZ72 1349 aa11.54□□□□□ -0.56
CLCN3-205ENST00000506924 MYO5AQ9Y4I1 1855 aaKnown RBP11.53□□□□□ -0.56
CLCN3-205ENST00000506924 MYH2Q9UKX2 1941 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 PATL2C9JE40 543 aaKnown RBP11.53□□□□□ -0.56
CLCN3-205ENST00000506924 HDLBPQ00341 1268 aaKnown RBP11.53□□□□□ -0.56
CLCN3-205ENST00000506924 TBCELQ5QJ74 424 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 ANKRD45Q5TZF3 282 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 SPTY2D1Q68D10 685 aaPredicted RBP11.53□□□□□ -0.56
CLCN3-205ENST00000506924 HHIPL2Q6UWX4 724 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 MOB2Q70IA6 237 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 APOBEC3FQ8IUX4 373 aaKnown RBP11.53□□□□□ -0.56
CLCN3-205ENST00000506924 ZNF384Q8TF68 577 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 EDC3Q96F86 508 aaKnown RBP11.53□□□□□ -0.56
CLCN3-205ENST00000506924 GMCL1Q96IK5 515 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 DNAJC2Q99543 621 aaKnown RBP11.53□□□□□ -0.56
CLCN3-205ENST00000506924 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 BOLA2Q9H3K6 86 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 MTMR7Q9Y216 660 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 PDS5AQ29RF7 1337 aaKnown RBP11.53□□□□□ -0.56
CLCN3-205ENST00000506924 ECM29Q5VYK3 1845 aa11.53□□□□□ -0.56
CLCN3-205ENST00000506924 RHOQP17081 205 aa11.52□□□□□ -0.57
CLCN3-205ENST00000506924 HDAC1Q13547 482 aaPredicted RBP11.52□□□□□ -0.57
CLCN3-205ENST00000506924 RASA3Q14644 834 aa11.52□□□□□ -0.57
CLCN3-205ENST00000506924 LBRQ14739 615 aaKnown RBP11.52□□□□□ -0.57
CLCN3-205ENST00000506924 CDC42EP5Q6NZY7 148 aa11.52□□□□□ -0.57
CLCN3-205ENST00000506924 NPAS3Q8IXF0 933 aa11.52□□□□□ -0.57
CLCN3-205ENST00000506924 DNAJC5GQ8N7S2 189 aa11.52□□□□□ -0.57
CLCN3-205ENST00000506924 OTUD7AQ8TE49 926 aaPredicted RBP11.52□□□□□ -0.57
CLCN3-205ENST00000506924 VTI1AQ96AJ9 217 aa11.52□□□□□ -0.57
CLCN3-205ENST00000506924 NSUN4Q96CB9 384 aaKnown RBP11.52□□□□□ -0.57
CLCN3-205ENST00000506924 ZNF512BQ96KM6 892 aaPredicted RBP11.52□□□□□ -0.57
CLCN3-205ENST00000506924 MRIQ9BWK5 157 aa11.52□□□□□ -0.57
CLCN3-205ENST00000506924 TMEM39BQ9GZU3 492 aa11.52□□□□□ -0.57
CLCN3-205ENST00000506924 RWDD1Q9H446 243 aaPredicted RBP11.52□□□□□ -0.57
CLCN3-205ENST00000506924 USP40Q9NVE5 1235 aa11.52□□□□□ -0.57
CLCN3-205ENST00000506924 ZNF232Q9UNY5 417 aa11.52□□□□□ -0.57
CLCN3-205ENST00000506924 SOBPA7XYQ1 873 aa11.51□□□□□ -0.57
CLCN3-205ENST00000506924 GOLIM4O00461 696 aa11.51□□□□□ -0.57
CLCN3-205ENST00000506924 IDH1O75874 414 aaKnown RBP11.51□□□□□ -0.57
CLCN3-205ENST00000506924 F11P03951 625 aa11.51□□□□□ -0.57
CLCN3-205ENST00000506924 BTDP43251 543 aa11.51□□□□□ -0.57
CLCN3-205ENST00000506924 TCP10Q12799 353 aa11.51□□□□□ -0.57
CLCN3-205ENST00000506924 NBPF12Q5TAG4 269 aaPredicted RBP11.51□□□□□ -0.57
CLCN3-205ENST00000506924 PHLDB3Q6NSJ2 640 aa11.51□□□□□ -0.57
CLCN3-205ENST00000506924 GBA2Q9HCG7 927 aaPredicted RBP11.51□□□□□ -0.57
CLCN3-205ENST00000506924 CEP350Q5VT06 3117 aa11.51□□□□□ -0.57
CLCN3-205ENST00000506924 UBE2Q2LH0YL09 131 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 PHKA2P46019 1235 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 NFIAQ12857 509 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 AAMPQ13685 434 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 HIF1AQ16665 826 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 DEFB115Q30KQ5 88 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 ZNF787Q6DD87 383 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 NAA16Q6N069 864 aaPredicted RBP11.5□□□□□ -0.57
CLCN3-205ENST00000506924 CYP4F22Q6NT55 531 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 ADGRA1Q86SQ6 560 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 SAPCD2Q86UD0 394 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 C2orf69Q8N8R5 385 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 MYO19Q96H55 970 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 CRISPLD1Q9H336 500 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 TMOD2Q9NZR1 351 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 MROH7-TTC4A0A0A0MT08 1334 aa11.5□□□□□ -0.57
CLCN3-205ENST00000506924 CARNS1A5YM72 827 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 MAP4K4O95819 1239 aaPredicted RBP11.49□□□□□ -0.57
CLCN3-205ENST00000506924 ATP5JP18859 108 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 VEGFBP49765 207 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 HUNKP57058 714 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 GSTO1P78417 241 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 PICALMQ13492 652 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 ZFPM1Q8IX07 1006 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 MAGEB6Q8N7X4 407 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 GCC1Q96CN9 775 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 KLRG1Q96E93 195 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 ECHDC1Q9NTX5 307 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 GAKO14976 1311 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 CNTNAP1P78357 1384 aa11.49□□□□□ -0.57
CLCN3-205ENST00000506924 GPR75-ASB3A0A0A6YYF3 556 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 LGR5O75473 907 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 CHGBP05060 677 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 LDHCP07864 332 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 ATP4AP20648 1035 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 CYP7A1P22680 504 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 MSX1P28360 303 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 NF2P35240 595 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 TNNI2P48788 182 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 DYNLL1P63167 89 aaKnown RBP11.48□□□□□ -0.57
CLCN3-205ENST00000506924 TNFAIP1Q13829 316 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 RTN1Q16799 776 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 KCTD17Q8N5Z5 321 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 CCDC155Q8N6L0 562 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 SH3RF3Q8TEJ3 882 aaPredicted RBP11.48□□□□□ -0.57
CLCN3-205ENST00000506924 TEPSINQ96N21 525 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 HAUS7Q99871 368 aa11.48□□□□□ -0.57
CLCN3-205ENST00000506924 LNPKQ9C0E8 428 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms