RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 TRIT1Q9H3H1 467 aaKnown RBP8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 KANSL2Q9H9L4 492 aa8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 ARHGEF4Q9NR80 690 aa8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 TMA7Q9Y2S6 64 aaKnown RBP8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 SUGT1Q9Y2Z0 365 aa8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 SNX11Q9Y5W9 270 aa8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
TRAPPC13-206ENST00000504751 TLDC2A0PJX2 215 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 H0Y8X5 98 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 AGRPO00253 132 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 SMARCA5O60264 1052 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 CLEC16AQ2KHT3 1053 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 C2orf27AQ580R0 203 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 CRTC3Q6UUV7 619 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 TRIM59Q8IWR1 403 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 LRRN4CLQ8ND94 238 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 PPP1R14AQ96A00 147 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 DSCC1Q9BVC3 393 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 RNF112Q9ULX5 631 aa8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 DIS3Q9Y2L1 958 aaKnown RBP8.28□□□□□ -1.08
TRAPPC13-206ENST00000504751 MEIS1O00470 390 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 PPP2R2AP63151 447 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 GRB10Q13322 594 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 PPP2R5DQ14738 602 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 THAP3Q8WTV1 239 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 UBE2FQ969M7 185 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 TCTN2Q96GX1 697 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 ZDHHC15Q96MV8 337 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 ATP13A1Q9HD20 1204 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 ZSWIM5Q9P217 1185 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 LRP2BPQ9P2M1 347 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 AKT3Q9Y243 479 aa8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 SF3B6Q9Y3B4 125 aaKnown RBP8.27□□□□□ -1.09
TRAPPC13-206ENST00000504751 GSNP06396 782 aa8.26□□□□□ -1.09
TRAPPC13-206ENST00000504751 TPP2P29144 1249 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC13-206ENST00000504751 GRIK1P39086 918 aa8.26□□□□□ -1.09
TRAPPC13-206ENST00000504751 POMZP3Q6PJE2 187 aa8.26□□□□□ -1.09
TRAPPC13-206ENST00000504751 CRACR2BQ8N4Y2 399 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC13-206ENST00000504751 HRASLS5Q96KN8 279 aa8.26□□□□□ -1.09
TRAPPC13-206ENST00000504751 NOP56O00567 594 aaKnown RBP8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 MED26O95402 600 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 FAM153BP0C7A2 387 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 BMP8BP34820 402 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 GRIA2P42262 883 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 CD97P48960 835 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 PRKCQQ04759 706 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 SQSTM1Q13501 440 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 INTS5Q6P9B9 1019 aaKnown RBP8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 TMPRSS7Q7RTY8 843 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 ZBTB38Q8NAP3 1195 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 BTN2A2Q8WVV5 523 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 BSDC1Q9NW68 430 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 PTCH2Q9Y6C5 1203 aa8.25□□□□□ -1.09
TRAPPC13-206ENST00000504751 COBLO75128 1261 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 KCNH1O95259 989 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 PRNPP04156 253 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 LONRF2Q1L5Z9 754 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 YOD1Q5VVQ6 348 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 GTF2IRD2BQ6EKJ0 949 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 SDE2Q6IQ49 451 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 GTF2IRD2Q86UP8 949 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 MISP3Q96FF7 219 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 MCMBPQ9BTE3 642 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 AARSD1Q9BTE6 412 aaKnown RBP8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 TMEM260Q9NX78 707 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 DUSP13Q9UII6 198 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 VAV3Q9UKW4 847 aa8.24□□□□□ -1.09
TRAPPC13-206ENST00000504751 KIAA1324LA8MWY0 1029 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 ENPP3O14638 875 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 ZNF205O95201 554 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 ESR1P03372 595 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 SPINK2P20155 84 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 HSP90AA2PQ14568 343 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 AOC3Q16853 763 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 FOXB2Q5VYV0 432 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 USHBP1Q8N6Y0 703 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 LINC00116Q8NCU8 138 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 ASB11Q8WXH4 323 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 NKX2-4Q9H2Z4 354 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 GPR55Q9Y2T6 319 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 PCDHA11Q9Y5I1 949 aa8.23□□□□□ -1.09
TRAPPC13-206ENST00000504751 TRAV20A0A0B4J274 112 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 FGFR1P11362 822 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 VAV1P15498 845 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 CD96P40200 585 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 AMPD2Q01433 879 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 CYP4F3Q08477 520 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 TMEM67Q5HYA8 995 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 CWF19L1Q69YN2 538 aaKnown RBP8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 RNF111Q6ZNA4 994 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 DTX1Q86Y01 620 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 BCL7CQ8WUZ0 217 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 SLC12A9Q9BXP2 914 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 FOXP3Q9BZS1 431 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 TCFL5Q9UL49 500 aa8.22□□□□□ -1.09
TRAPPC13-206ENST00000504751 ESYT3A0FGR9 886 aa8.21□□□□□ -1.1
TRAPPC13-206ENST00000504751 STXBP3O00186 592 aa8.21□□□□□ -1.1
TRAPPC13-206ENST00000504751 ADAM23O75077 832 aa8.21□□□□□ -1.1
TRAPPC13-206ENST00000504751 VAMP4O75379 141 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms