RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 ADGRF4Q8IZF3 695 aa12.02□□□□□ -0.49
TPM3-217ENST00000504663 WASF1Q92558 559 aa12.02□□□□□ -0.49
TPM3-217ENST00000504663 GPKOWQ92917 476 aaPredicted RBP eCLIP12.02□□□□□ -0.491e-12■□□□□ 9.1
TPM3-217ENST00000504663 ARHGEF10LQ9HCE6 1279 aa12.02□□□□□ -0.49
TPM3-217ENST00000504663 LMBRD1Q9NUN5 540 aa12.02□□□□□ -0.49
TPM3-217ENST00000504663 RBBP6Q7Z6E9 1792 aaKnown RBP12.02□□□□□ -0.49
TPM3-217ENST00000504663 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.49
TPM3-217ENST00000504663 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 USP17L10C9JJH3 530 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 BMP3P12645 472 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 PTPRAP18433 802 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 SLC16A2P36021 539 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 FMR1Q06787 632 aaKnown RBP eCLIP12.01□□□□□ -0.49
TPM3-217ENST00000504663 VGLL4Q14135 290 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 CCDC96Q2M329 555 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 FOXD4L6Q3SYB3 417 aaPredicted RBP12.01□□□□□ -0.49
TPM3-217ENST00000504663 SUPT20HL1Q3ZLR7 823 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 FOXD4L3Q6VB84 417 aaPredicted RBP12.01□□□□□ -0.49
TPM3-217ENST00000504663 MOB2Q70IA6 237 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 DIS3L2Q8IYB7 885 aaKnown RBP12.01□□□□□ -0.49
TPM3-217ENST00000504663 DAGLBQ8NCG7 672 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 HOOK2Q96ED9 719 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 C12orf42Q96LP6 360 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 FTOQ9C0B1 505 aaKnown RBP eCLIP12.01□□□□□ -0.49
TPM3-217ENST00000504663 KIAA1683Q9H0B3 1180 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 ZSCAN16Q9H4T2 348 aaPredicted RBP12.01□□□□□ -0.49
TPM3-217ENST00000504663 BARHL2Q9NY43 387 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
TPM3-217ENST00000504663 TRPM7Q96QT4 1865 aa12.01□□□□□ -0.49
TPM3-217ENST00000504663 BTBD18B2RXH4 712 aa12□□□□□ -0.49
TPM3-217ENST00000504663 WNT7AO00755 349 aa12□□□□□ -0.49
TPM3-217ENST00000504663 PLA2G6O60733 806 aa12□□□□□ -0.49
TPM3-217ENST00000504663 SLC1A4P43007 532 aa12□□□□□ -0.49
TPM3-217ENST00000504663 NR5A1Q13285 461 aa12□□□□□ -0.49
TPM3-217ENST00000504663 EAPPQ56P03 285 aaPredicted RBP12□□□□□ -0.49
TPM3-217ENST00000504663 FAM83BQ5T0W9 1011 aa12□□□□□ -0.49
TPM3-217ENST00000504663 MYSM1Q5VVJ2 828 aa12□□□□□ -0.49
TPM3-217ENST00000504663 MCTP1Q6DN14 999 aa12□□□□□ -0.49
TPM3-217ENST00000504663 PNMA8AQ86V59 439 aaPredicted RBP12□□□□□ -0.49
TPM3-217ENST00000504663 SPICE1Q8N0Z3 855 aa12□□□□□ -0.49
TPM3-217ENST00000504663 PIBF1Q8WXW3 757 aa12□□□□□ -0.49
TPM3-217ENST00000504663 GBP4Q96PP9 640 aa12□□□□□ -0.49
TPM3-217ENST00000504663 USP28Q96RU2 1077 aa12□□□□□ -0.49
TPM3-217ENST00000504663 GDPD2Q9HCC8 539 aa12□□□□□ -0.49
TPM3-217ENST00000504663 NMRK2Q9NPI5 230 aa12□□□□□ -0.49
TPM3-217ENST00000504663 SH3GLB2Q9NR46 395 aa12□□□□□ -0.49
TPM3-217ENST00000504663 EMILIN3Q9NT22 766 aa12□□□□□ -0.49
TPM3-217ENST00000504663 ESYT2A0FGR8 921 aa11.99□□□□□ -0.49
TPM3-217ENST00000504663 TRAF5O00463 557 aa11.99□□□□□ -0.49
TPM3-217ENST00000504663 TAL1P17542 331 aaPredicted RBP11.99□□□□□ -0.49
TPM3-217ENST00000504663 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
TPM3-217ENST00000504663 SYDE2Q5VT97 1194 aa11.99□□□□□ -0.49
TPM3-217ENST00000504663 BRAPQ7Z569 592 aa11.99□□□□□ -0.49
TPM3-217ENST00000504663 FAM177A1Q8N128 213 aaPredicted RBP11.99□□□□□ -0.49
TPM3-217ENST00000504663 FOXP1Q9H334 677 aaPredicted RBP11.99□□□□□ -0.49
TPM3-217ENST00000504663 RRAGCQ9HB90 399 aa11.99□□□□□ -0.49
TPM3-217ENST00000504663 AFG3L2Q9Y4W6 797 aa11.99□□□□□ -0.49
TPM3-217ENST00000504663 DDX11L8A8MPP1 907 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 TMEM232C9JQI7 657 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 hCG_1984214I3L0E3 225 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 OPLAHO14841 1288 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 ZBTB5O15062 677 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 WDR46O15213 610 aaKnown RBP11.98□□□□□ -0.49
TPM3-217ENST00000504663 GADD45BO75293 160 aaPredicted RBP11.98□□□□□ -0.49
TPM3-217ENST00000504663 VCAM1P19320 739 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 NASPP49321 788 aaPredicted RBP11.98□□□□□ -0.49
TPM3-217ENST00000504663 BACE1P56817 501 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 MAP3K9P80192 1104 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 MTMR2Q13614 643 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 PRKG1Q13976 671 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 ZYXQ15942 572 aaKnown RBP11.98□□□□□ -0.49
TPM3-217ENST00000504663 CDC37Q16543 378 aaPredicted RBP11.98□□□□□ -0.49
TPM3-217ENST00000504663 QRICH1Q2TAL8 776 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 SH3D19Q5HYK7 790 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 LDLRAD1Q5T700 205 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 MAP1SQ66K74 1059 aaPredicted RBP11.98□□□□□ -0.49
TPM3-217ENST00000504663 HOMER1Q86YM7 354 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 NOSTRINQ8IVI9 506 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 ZNF713Q8N859 430 aaPredicted RBP11.98□□□□□ -0.49
TPM3-217ENST00000504663 ZNF280CQ8ND82 737 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 RRP36Q96EU6 259 aaKnown RBP11.98□□□□□ -0.49
TPM3-217ENST00000504663 CLMNQ96JQ2 1002 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 ZMYND12Q9H0C1 365 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 RANBP17Q9H2T7 1088 aaKnown RBP11.98□□□□□ -0.49
TPM3-217ENST00000504663 SH2D4AQ9H788 454 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 GOPCQ9HD26 462 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 FBXO28Q9NVF7 368 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 PRR12Q9ULL5 1215 aa11.98□□□□□ -0.49
TPM3-217ENST00000504663 ZNF536O15090 1300 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 ELP1O95163 1332 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 PNMA6FA0A0J9YX94 578 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 FIBPO43427 364 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 EDIL3O43854 480 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 KRT2P35908 639 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 GJA5P36382 358 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 SNAP25P60880 206 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 AKAP17AQ02040 695 aaKnown RBP11.97□□□□□ -0.49
TPM3-217ENST00000504663 SPP2Q13103 211 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 MOGSQ13724 837 aa11.97□□□□□ -0.49
TPM3-217ENST00000504663 PTPAQ15257 358 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms