RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 USP17L18D6R9N7 530 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 USP17L22D6RA61 530 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 USP17L17D6RBQ6 530 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 USP17L19D6RCP7 530 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 USP17L20D6RJB6 530 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 USP17L24Q0WX57 530 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 FAM160B2Q86V87 743 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 SMARCC2Q8TAQ2 1214 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 INTS4Q96HW7 963 aaKnown RBP22.7■■□□□ 1.22
LINC01550-201ENST00000499006 TANGO6Q9C0B7 1094 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 FBXO28Q9NVF7 368 aa22.7■■□□□ 1.22
LINC01550-201ENST00000499006 ISY1Q9ULR0 285 aaKnown RBP22.7■■□□□ 1.22
LINC01550-201ENST00000499006 SYDE2Q5VT97 1194 aa22.69■■□□□ 1.22
LINC01550-201ENST00000499006 CPLX2Q6PUV4 134 aaKnown RBP22.69■■□□□ 1.22
LINC01550-201ENST00000499006 ADGRF4Q8IZF3 695 aa22.69■■□□□ 1.22
LINC01550-201ENST00000499006 CCDC82Q8N4S0 544 aa22.69■■□□□ 1.22
LINC01550-201ENST00000499006 MTMR8Q96EF0 704 aa22.69■■□□□ 1.22
LINC01550-201ENST00000499006 PTPN18Q99952 460 aa22.69■■□□□ 1.22
LINC01550-201ENST00000499006 BTBD19C9JJ37 291 aa22.68■■□□□ 1.22
LINC01550-201ENST00000499006 CDKL5O76039 1030 aa22.68■■□□□ 1.22
LINC01550-201ENST00000499006 PRPF38AQ8NAV1 312 aaKnown RBP22.68■■□□□ 1.22
LINC01550-201ENST00000499006 PHKBQ93100 1093 aa22.68■■□□□ 1.22
LINC01550-201ENST00000499006 CAPNS2Q96L46 248 aa22.68■■□□□ 1.22
LINC01550-201ENST00000499006 SLF1Q9BQI6 1058 aa22.68■■□□□ 1.22
LINC01550-201ENST00000499006 JMJD4Q9H9V9 463 aa22.68■■□□□ 1.22
LINC01550-201ENST00000499006 PRR12Q9ULL5 1215 aa22.68■■□□□ 1.22
LINC01550-201ENST00000499006 SLC45A1Q9Y2W3 748 aa22.68■■□□□ 1.22
LINC01550-201ENST00000499006 JAK2O60674 1132 aa22.67■■□□□ 1.22
LINC01550-201ENST00000499006 DTNBO60941 627 aa22.67■■□□□ 1.22
LINC01550-201ENST00000499006 FLOT1O75955 427 aa22.67■■□□□ 1.22
LINC01550-201ENST00000499006 FMNL1O95466 1100 aaPredicted RBP22.67■■□□□ 1.22
LINC01550-201ENST00000499006 ANKRD23Q86SG2 305 aa22.67■■□□□ 1.22
LINC01550-201ENST00000499006 RNF26Q9BY78 433 aaPredicted RBP22.67■■□□□ 1.22
LINC01550-201ENST00000499006 PPP1R9AQ9ULJ8 1098 aa22.67■■□□□ 1.22
LINC01550-201ENST00000499006 ADAMTS5Q9UNA0 930 aa22.67■■□□□ 1.22
LINC01550-201ENST00000499006 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.67■■□□□ 1.22
LINC01550-201ENST00000499006 THSD7BQ9C0I4 1608 aa22.67■■□□□ 1.22
LINC01550-201ENST00000499006 MYPNQ86TC9 1320 aa22.67■■□□□ 1.22
LINC01550-201ENST00000499006 STK36Q9NRP7 1315 aa22.67■■□□□ 1.22
LINC01550-201ENST00000499006 PTPDC1A2A3K4 754 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 PRPF3O43395 683 aaKnown RBP22.66■■□□□ 1.22
LINC01550-201ENST00000499006 PPFIA3O75145 1194 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 INHBEP58166 350 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 C1QTNF8P60827 252 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 HTRA3P83110 453 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 IKQ13123 557 aaPredicted RBP22.66■■□□□ 1.22
LINC01550-201ENST00000499006 PABPC4Q13310 644 aaKnown RBP eCLIP22.66■■□□□ 1.22
LINC01550-201ENST00000499006 COG2Q14746 738 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 PAXIP1Q6ZW49 1069 aaPredicted RBP22.66■■□□□ 1.22
LINC01550-201ENST00000499006 ZIC5Q96T25 663 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 FDPSP14324 419 aaKnown RBP22.66■■□□□ 1.22
LINC01550-201ENST00000499006 DSG3P32926 999 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 SSRP1Q08945 709 aaKnown RBP22.66■■□□□ 1.22
LINC01550-201ENST00000499006 NOGQ13253 232 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 FAM43AQ8N2R8 423 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 KIFC2Q96AC6 838 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 SLC26A6Q9BXS9 759 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 ASCC2Q9H1I8 757 aaPredicted RBP22.66■■□□□ 1.22
LINC01550-201ENST00000499006 VAT1LQ9HCJ6 419 aa22.66■■□□□ 1.22
LINC01550-201ENST00000499006 PDHXO00330 501 aa22.65■■□□□ 1.22
LINC01550-201ENST00000499006 TM4SF4P48230 202 aa22.65■■□□□ 1.22
LINC01550-201ENST00000499006 SLC4A3P48751 1232 aa22.65■■□□□ 1.22
LINC01550-201ENST00000499006 TRIM22Q8IYM9 498 aa22.65■■□□□ 1.22
LINC01550-201ENST00000499006 RANBP17Q9H2T7 1088 aaKnown RBP22.65■■□□□ 1.22
LINC01550-201ENST00000499006 HOXC10Q9NYD6 342 aa22.65■■□□□ 1.22
LINC01550-201ENST00000499006 V9GY48 417 aaPredicted RBP22.65■■□□□ 1.22
LINC01550-201ENST00000499006 SPDYE16A6NNV3 312 aaPredicted RBP22.64■■□□□ 1.21
LINC01550-201ENST00000499006 HSPA6P17066 643 aa22.64■■□□□ 1.21
LINC01550-201ENST00000499006 HMGN5P82970 282 aaKnown RBP22.64■■□□□ 1.21
LINC01550-201ENST00000499006 KIF23Q02241 960 aaPredicted RBP22.64■■□□□ 1.21
LINC01550-201ENST00000499006 PKN1Q16512 942 aa22.64■■□□□ 1.21
LINC01550-201ENST00000499006 LBX2Q6XYB7 198 aa22.64■■□□□ 1.21
LINC01550-201ENST00000499006 PIGSQ96S52 555 aa22.64■■□□□ 1.21
LINC01550-201ENST00000499006 ZCCHC17Q9NP64 241 aaKnown RBP22.64■■□□□ 1.21
LINC01550-201ENST00000499006 RBM27Q9P2N5 1060 aaKnown RBP22.64■■□□□ 1.21
LINC01550-201ENST00000499006 ORC3Q9UBD5 711 aaPredicted RBP22.64■■□□□ 1.21
LINC01550-201ENST00000499006 WDR33Q9C0J8 1336 aaKnown RBP22.63■■□□□ 1.21
LINC01550-201ENST00000499006 IGF2BP3O00425 579 aaKnown RBP eCLIP22.63■■□□□ 1.21
LINC01550-201ENST00000499006 VWA5AO00534 786 aa22.63■■□□□ 1.21
LINC01550-201ENST00000499006 FDX1P10109 184 aa22.63■■□□□ 1.21
LINC01550-201ENST00000499006 OSBPP22059 807 aa22.63■■□□□ 1.21
LINC01550-201ENST00000499006 IRX3P78415 501 aaPredicted RBP22.63■■□□□ 1.21
LINC01550-201ENST00000499006 SREBF2Q12772 1141 aa22.63■■□□□ 1.21
LINC01550-201ENST00000499006 GRM1Q13255 1194 aa22.63■■□□□ 1.21
LINC01550-201ENST00000499006 POTEEQ6S8J3 1075 aa22.63■■□□□ 1.21
LINC01550-201ENST00000499006 ATG4CQ96DT6 458 aa22.63■■□□□ 1.21
LINC01550-201ENST00000499006 RRP36Q96EU6 259 aaKnown RBP22.63■■□□□ 1.21
LINC01550-201ENST00000499006 DDX11Q96FC9 970 aa22.63■■□□□ 1.21
LINC01550-201ENST00000499006 P2RX7Q99572 595 aaKnown RBP22.63■■□□□ 1.21
LINC01550-201ENST00000499006 SLC38A10Q9HBR0 1119 aa22.63■■□□□ 1.21
LINC01550-201ENST00000499006 PNMA6FA0A0J9YX94 578 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 hCG_1642624A0A1W2PR95 340 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 ZBTB5O15062 677 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 AOC2O75106 756 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 DEXIO95424 95 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 VEGFBP49765 207 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 CDC37Q16543 378 aaPredicted RBP22.62■■□□□ 1.21
LINC01550-201ENST00000499006 IFNL1Q8IU54 200 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 REPS2Q8NFH8 660 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 IPO9Q96P70 1041 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms