RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 C6orf222P0C671 652 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-209ENST00000498725 PDE6AP16499 860 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 STAT3P40763 770 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 ADGRE1Q14246 886 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 SLFNL1Q499Z3 407 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 MFSD5Q6N075 450 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 ANKRD33Q7Z3H0 272 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 RIOX2Q8IUF8 465 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 DNAJC2Q99543 621 aaKnown RBP11.03□□□□□ -0.64
CCDC171-209ENST00000498725 TSEN34Q9BSV6 310 aaKnown RBP11.03□□□□□ -0.64
CCDC171-209ENST00000498725 SH2D4AQ9H788 454 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 DCP1AQ9NPI6 582 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-209ENST00000498725 NRBP1Q9UHY1 535 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 MSRAQ9UJ68 235 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 FAM184BQ9ULE4 1060 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 EXOC6BQ9Y2D4 811 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 TMX2Q9Y320 296 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 MYH7P12883 1935 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 MYH4Q9Y623 1939 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
CCDC171-209ENST00000498725 GOLIM4O00461 696 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 IGSF3O75054 1194 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 ASGR1P07306 291 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 EEF2P13639 858 aaKnown RBP11.02□□□□□ -0.65
CCDC171-209ENST00000498725 CYP2C18P33260 490 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 PLA2G5P39877 138 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 STK11IPQ8N1F8 1099 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 TMEM199Q8N511 208 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 GLT1D1Q96MS3 346 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 TOX2Q96NM4 488 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 NUP88Q99567 741 aaPredicted RBP11.02□□□□□ -0.65
CCDC171-209ENST00000498725 IL1RAPL2Q9NP60 686 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 TBX21Q9UL17 535 aa11.02□□□□□ -0.65
CCDC171-209ENST00000498725 MOXD2PA6NHM9 499 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 C19orf67A6NJJ6 358 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 VWA5AO00534 786 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 ADCY6O43306 1168 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 SNAI1O95863 264 aaPredicted RBP11.01□□□□□ -0.65
CCDC171-209ENST00000498725 CDK8P49336 464 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 TFF2Q03403 129 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 SKIV2LQ15477 1246 aaKnown RBP11.01□□□□□ -0.65
CCDC171-209ENST00000498725 AKNAD1Q5T1N1 836 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 SNRNP48Q6IEG0 339 aaKnown RBP11.01□□□□□ -0.65
CCDC171-209ENST00000498725 CCDC174Q6PII3 467 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 ITPRIPQ8IWB1 547 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 CPXCR1Q8N123 301 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 KLHDC9Q8NEP7 349 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 SLC28A3Q9HAS3 691 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 SWAP70Q9UH65 585 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 DIS3Q9Y2L1 958 aaKnown RBP11.01□□□□□ -0.65
CCDC171-209ENST00000498725 MROH7Q68CQ1 1323 aa11.01□□□□□ -0.65
CCDC171-209ENST00000498725 TLR3O15455 904 aaKnown RBP11□□□□□ -0.65
CCDC171-209ENST00000498725 MBD4O95243 580 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 RABGGTBP53611 331 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 BEX3Q00994 111 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 TTF1Q15361 905 aaPredicted RBP11□□□□□ -0.65
CCDC171-209ENST00000498725 RAB30Q15771 203 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 GNASQ5JWF2 1037 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 ZKSCAN2Q63HK3 967 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 PSRC1Q6PGN9 363 aaPredicted RBP11□□□□□ -0.65
CCDC171-209ENST00000498725 OTOP2Q7RTS6 562 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 GOPCQ9HD26 462 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 CXXC1Q9P0U4 656 aaPredicted RBP11□□□□□ -0.65
CCDC171-209ENST00000498725 ZNF214Q9UL59 606 aaPredicted RBP11□□□□□ -0.65
CCDC171-209ENST00000498725 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 YBX2Q9Y2T7 364 aaKnown RBP11□□□□□ -0.65
CCDC171-209ENST00000498725 NOP58Q9Y2X3 529 aaKnown RBP11□□□□□ -0.65
CCDC171-209ENST00000498725 RIPK3Q9Y572 518 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 CTDP1Q9Y5B0 961 aaPredicted RBP11□□□□□ -0.65
CCDC171-209ENST00000498725 REV3LO60673 3130 aa11□□□□□ -0.65
CCDC171-209ENST00000498725 A0A0U1RQG5 324 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-209ENST00000498725 TCRBV5S4A2TA0A5A2 114 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 USP17L12C9JPN9 530 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 USP17L21D6R901 530 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 ARVCFO00192 962 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 DUSP11O75319 330 aaKnown RBP10.99□□□□□ -0.65
CCDC171-209ENST00000498725 FGBP02675 491 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 MYOGP15173 224 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 CDK7P50613 346 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 CCL23P55773 120 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 ACVR2BQ13705 512 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 CCDC144BQ3MJ40 725 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 RASIP1Q5U651 963 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 CCSAPQ6IQ19 270 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-209ENST00000498725 NOL8Q76FK4 1167 aaKnown RBP10.99□□□□□ -0.65
CCDC171-209ENST00000498725 AMOTL1Q8IY63 956 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 FTSJ3Q8IY81 847 aaKnown RBP10.99□□□□□ -0.65
CCDC171-209ENST00000498725 PCSK9Q8NBP7 692 aaKnown RBP10.99□□□□□ -0.65
CCDC171-209ENST00000498725 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-209ENST00000498725 SPC25Q9HBM1 224 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 IL23AQ9NPF7 189 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-209ENST00000498725 ADAMTS5Q9UNA0 930 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 UMODL1Q5DID0 1318 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 ROBO3Q96MS0 1386 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 SCN5AQ14524 2016 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 CHD9Q3L8U1 2897 aa10.99□□□□□ -0.65
CCDC171-209ENST00000498725 TTC28Q96AY4 2481 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms