RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 H2AFB1P0C5Y9 115 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 H2AFB2P0C5Z0 115 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 ELNP15502 786 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 RXRBP28702 533 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 CAP2P40123 477 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 STAT3P40763 770 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 KCNJ6P48051 423 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 RNF4P78317 190 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 NFKB2Q00653 900 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 CDK5R2Q13319 367 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 LRP8Q14114 963 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 SGO2Q562F6 1265 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 ZC3H12BQ5HYM0 836 aaKnown RBP5.07□□□□□ -1.6
CALD1-224ENST00000498254 NOL9Q5SY16 702 aaKnown RBP5.07□□□□□ -1.6
CALD1-224ENST00000498254 KRT26Q7Z3Y9 468 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 FERMT3Q86UX7 667 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 SCUBE1Q8IWY4 988 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 MFSD2AQ8NA29 543 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 OSBP2Q969R2 916 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 ZDHHC15Q96MV8 337 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 IRF2BPLQ9H1B7 796 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 GSX1Q9H4S2 264 aaPredicted RBP5.07□□□□□ -1.6
CALD1-224ENST00000498254 HOMER2Q9NSB8 354 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 GFOD1Q9NXC2 390 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 WHRNQ9P202 907 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 CGGBP1Q9UFW8 167 aaPredicted RBP5.07□□□□□ -1.6
CALD1-224ENST00000498254 SFMBT1Q9UHJ3 866 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 CEP131Q9UPN4 1083 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 ATP8A1Q9Y2Q0 1164 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 PCDHB12Q9Y5F1 795 aa5.07□□□□□ -1.6
CALD1-224ENST00000498254 CCDC163A0A0D9SF12 145 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 PDGFRBP09619 1106 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 POU3F3P20264 500 aaPredicted RBP5.06□□□□□ -1.6
CALD1-224ENST00000498254 SOX5P35711 763 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 ZNF445P59923 1031 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 SUMO1P63165 101 aaKnown RBP5.06□□□□□ -1.6
CALD1-224ENST00000498254 DPY19L1Q2PZI1 675 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 BRAPQ7Z569 592 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 DDX42Q86XP3 938 aaKnown RBP eCLIP5.06□□□□□ -1.6
CALD1-224ENST00000498254 TOP6BLQ8N6T0 577 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 LEO1Q8WVC0 666 aaPredicted RBP5.06□□□□□ -1.6
CALD1-224ENST00000498254 JDP2Q8WYK2 163 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 DSCC1Q9BVC3 393 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 TMX1Q9H3N1 280 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 SEMA6CQ9H3T2 930 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 ACSS3Q9H6R3 686 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 CAAP1Q9H8G2 361 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 AKTIPQ9H8T0 292 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 TPX2Q9ULW0 747 aaKnown RBP5.06□□□□□ -1.6
CALD1-224ENST00000498254 MINPP1Q9UNW1 487 aa5.06□□□□□ -1.6
CALD1-224ENST00000498254 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.05□□□□□ -1.6
CALD1-224ENST00000498254 DLX3O60479 287 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 VAMP4O75379 141 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 RFPL3O75679 317 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 SNRPB2P08579 225 aaKnown RBP5.05□□□□□ -1.6
CALD1-224ENST00000498254 FGFR1P11362 822 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 ECI1P42126 302 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 PRSS53Q2L4Q9 553 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 NBPF9Q3BBW0 867 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 FNDC3BQ53EP0 1204 aaKnown RBP5.05□□□□□ -1.6
CALD1-224ENST00000498254 ODR4Q5SWX8 454 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 GTF2IRD2BQ6EKJ0 949 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 RNF180Q86T96 592 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 GTF2IRD2Q86UP8 949 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 LRRTM3Q86VH5 581 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 TRIM59Q8IWR1 403 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 FIBCD1Q8N539 461 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 ATL2Q8NHH9 583 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 SLC7A14Q8TBB6 771 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 MRGPRX3Q96LB0 322 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 PRDM14Q9GZV8 571 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 SLC52A2Q9HAB3 445 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 GPR55Q9Y2T6 319 aaPredicted RBP5.05□□□□□ -1.6
CALD1-224ENST00000498254 EMC9Q9Y3B6 208 aa5.05□□□□□ -1.6
CALD1-224ENST00000498254 GSG1L2A8MUP6 293 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 C9orf172C9J069 976 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 HYAL3O43820 417 aaPredicted RBP5.04□□□□□ -1.6
CALD1-224ENST00000498254 OPA1O60313 960 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 DNAJC8O75937 253 aaPredicted RBP5.04□□□□□ -1.6
CALD1-224ENST00000498254 C6orf222P0C671 652 aaPredicted RBP5.04□□□□□ -1.6
CALD1-224ENST00000498254 ETV3P41162 512 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 IREB2P48200 963 aaKnown RBP5.04□□□□□ -1.6
CALD1-224ENST00000498254 NEK4P51957 841 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 STRN3Q13033 797 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 ZNF460Q14592 562 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 POMZP3Q6PJE2 187 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 USP53Q70EK8 1073 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 TMC3Q7Z5M5 1100 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 FGD2Q7Z6J4 655 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 CRACR2BQ8N4Y2 399 aaPredicted RBP5.04□□□□□ -1.6
CALD1-224ENST00000498254 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 VWCEQ96DN2 955 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 UBL7Q96S82 380 aaPredicted RBP5.04□□□□□ -1.6
CALD1-224ENST00000498254 CEP89Q96ST8 783 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 CHMP4AQ9BY43 222 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 MRPL4Q9BYD3 311 aaKnown RBP5.04□□□□□ -1.6
CALD1-224ENST00000498254 CEP41Q9BYV8 373 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 PRDM10Q9NQV6 1147 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 TRAF6Q9Y4K3 522 aa5.04□□□□□ -1.6
CALD1-224ENST00000498254 TNPO3Q9Y5L0 923 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms