RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 PLEKHM2Q8IWE5 1019 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 LRRC47Q8N1G4 583 aaKnown RBP10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 PRPF38AQ8NAV1 312 aaKnown RBP10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 GMCL1P1Q8NEA9 526 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 REPS2Q8NFH8 660 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 MMP19Q99542 508 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 NBPF3Q9H094 633 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 C11orf49Q9H6J7 331 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 ANAPC4Q9UJX5 808 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 ZNF214Q9UL59 606 aaPredicted RBP10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 MSCO60682 206 aa10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 COBLO75128 1261 aa10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 IGHA2P01877 340 aa10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 HSPD1P10809 573 aaKnown RBP10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 CYBAP13498 195 aa10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 MNX1P50219 401 aaPredicted RBP10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 PPP4R3BQ5MIZ7 849 aa10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 ZNF589Q86UQ0 364 aaPredicted RBP10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 MAML3Q96JK9 1138 aa10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 INCENPQ9NQS7 918 aa10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 DDX20Q9UHI6 824 aaKnown RBP10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 FEM1BQ9UK73 627 aa10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 COLQQ9Y215 455 aaPredicted RBP10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 CTDP1Q9Y5B0 961 aaPredicted RBP10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 ZMYM6O95789 1325 aa10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 CCDC171Q6TFL3 1326 aa10.05□□□□□ -0.8
HMGXB4-207ENST00000498212 ORC4O43929 436 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 RANBP6O60518 1105 aaKnown RBP10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 ZBED4O75132 1171 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 FGAP02671 866 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 BMP3P12645 472 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 SDSP20132 328 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 KCTD2Q14681 263 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 SLFN13Q68D06 897 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 SNRNP48Q6IEG0 339 aaKnown RBP10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 TRPV1Q8NER1 839 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 KIFC2Q96AC6 838 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 TEX13BQ9BXU2 312 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 TOMM22Q9NS69 142 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 ISY1Q9ULR0 285 aaKnown RBP10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 STX8Q9UNK0 236 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 TACC3Q9Y6A5 838 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 PFASO15067 1338 aa10.04□□□□□ -0.8
HMGXB4-207ENST00000498212 MYH6P13533 1939 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 ATP2A1O14983 1001 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 NMT2O60551 498 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 PGK2P07205 417 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 FGRP09769 529 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 SLC1A4P43007 532 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 SLC4A3P48751 1232 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 STAT2P52630 851 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 RRP12Q5JTH9 1297 aaKnown RBP10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 C7orf61Q8IZ16 206 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 CPXCR1Q8N123 301 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 GMCL1Q96IK5 515 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 SLC38A10Q9HBR0 1119 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 IL17RBQ9NRM6 502 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 DIAPH3Q9NSV4 1193 aa10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 DIS3Q9Y2L1 958 aaKnown RBP10.03□□□□□ -0.8
HMGXB4-207ENST00000498212 LCTP09848 1927 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 TMEM232C9JQI7 657 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 HIP1O00291 1037 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 SEPT4O43236 478 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 FDX1P10109 184 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 COL6A1P12109 1028 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 MCCP23508 829 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 OAZ1P54368 228 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 HAND2P61296 217 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 IRX6P78412 446 aaPredicted RBP10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 IKQ13123 557 aaPredicted RBP10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 ZNF792Q3KQV3 632 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 CWC27Q6UX04 472 aaKnown RBP10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 FAM160B2Q86V87 743 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 CHURC1Q8WUH1 139 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 CHMP4CQ96CF2 233 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 DDX11Q96FC9 970 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 RAVER2Q9HCJ3 691 aaKnown RBP10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 RIPK3Q9Y572 518 aa10.02□□□□□ -0.81
HMGXB4-207ENST00000498212 DNM1LO00429 736 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 PCP11498 1178 aaKnown RBP10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 NOVP48745 357 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 PRAMEF19Q5SWL8 479 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 AKNAD1Q5T1N1 836 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 ANO1Q5XXA6 986 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 RCSD1Q6JBY9 416 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 MFSD6Q6ZSS7 791 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 CHST13Q8NET6 341 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 STAG1Q8WVM7 1258 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 TINF2Q9BSI4 451 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 RBM27Q9P2N5 1060 aaKnown RBP10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 FBXO40Q9UH90 709 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 NRBP1Q9UHY1 535 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 MTMR7Q9Y216 660 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 LRRC37A2A6NM11 1700 aa10.01□□□□□ -0.81
HMGXB4-207ENST00000498212 LTBP2Q14767 1821 aa10□□□□□ -0.81
HMGXB4-207ENST00000498212 DNAJC25-GNG10A0A024R161 153 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms