RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 PGK1P00558 417 aa16.18■□□□□ 0.18
SPTAN1-209ENST00000497216 CLTBP09497 229 aa16.18■□□□□ 0.18
SPTAN1-209ENST00000497216 KLRC3Q07444 240 aa16.18■□□□□ 0.18
SPTAN1-209ENST00000497216 PRPF38AQ8NAV1 312 aaKnown RBP16.18■□□□□ 0.18
SPTAN1-209ENST00000497216 APPBP2Q92624 585 aa16.18■□□□□ 0.18
SPTAN1-209ENST00000497216 CNPY2Q9Y2B0 182 aa16.18■□□□□ 0.18
SPTAN1-209ENST00000497216 SMARCA5O60264 1052 aaPredicted RBP16.17■□□□□ 0.18
SPTAN1-209ENST00000497216 NDUFB10O96000 172 aa16.17■□□□□ 0.18
SPTAN1-209ENST00000497216 SNRNP48Q6IEG0 339 aaKnown RBP16.17■□□□□ 0.18
SPTAN1-209ENST00000497216 ANKRD33Q7Z3H0 272 aa16.17■□□□□ 0.18
SPTAN1-209ENST00000497216 ZNF467Q7Z7K2 595 aaPredicted RBP16.17■□□□□ 0.18
SPTAN1-209ENST00000497216 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.17■□□□□ 0.18
SPTAN1-209ENST00000497216 OSBP2Q969R2 916 aa16.17■□□□□ 0.18
SPTAN1-209ENST00000497216 TOX2Q96NM4 488 aa16.17■□□□□ 0.18
SPTAN1-209ENST00000497216 NUP88Q99567 741 aaPredicted RBP16.17■□□□□ 0.18
SPTAN1-209ENST00000497216 MKNK2Q9HBH9 465 aa16.17■□□□□ 0.18
SPTAN1-209ENST00000497216 PLIN4Q96Q06 1357 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 TMEM265A0A087WTH1 108 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 RAD21O60216 631 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 SNAI1O95863 264 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 ZFYP08048 801 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 GNAT2P19087 354 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 ITGB8P26012 769 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 KLHDC9Q8NEP7 349 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 MKL1Q969V6 931 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 FAM161BQ96MY7 647 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 CDX2Q99626 313 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 SEMA6BQ9H3T3 888 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 EPB41L4AQ9HCS5 686 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 RIPK3Q9Y572 518 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 LRRC37A2A6NM11 1700 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 SYNRGQ9UMZ2 1314 aa16.16■□□□□ 0.18
SPTAN1-209ENST00000497216 MOXD2PA6NHM9 499 aa16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 RNF113AO15541 343 aaKnown RBP16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 CST5P28325 142 aaPredicted RBP16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 C20orf194Q5TEA3 1177 aa16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 CCSAPQ6IQ19 270 aaPredicted RBP16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 DDX11Q96FC9 970 aa16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 GPATCH3Q96I76 525 aa16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 DCTPP1Q9H773 170 aa16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 SLC38A10Q9HBR0 1119 aa16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 ZNF287Q9HBT7 754 aa16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 FAM184BQ9ULE4 1060 aa16.15■□□□□ 0.18
SPTAN1-209ENST00000497216 MINDY4BA8MYZ0 360 aa16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 GPAA1O43292 621 aa16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 ZBED4O75132 1171 aa16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 DUSP11O75319 330 aaKnown RBP16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 ACLYP53396 1101 aa16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 OAZ1P54368 228 aa16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 GMCL1P1Q8NEA9 526 aa16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 NUP133Q8WUM0 1156 aa16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 LENG1Q96BZ8 264 aaPredicted RBP16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 COL25A1Q9BXS0 654 aaPredicted RBP16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 TTYH1Q9H313 450 aaPredicted RBP16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 MTMR4Q9NYA4 1195 aa16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 FBXO40Q9UH90 709 aa16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 FEM1BQ9UK73 627 aa16.14■□□□□ 0.17
SPTAN1-209ENST00000497216 PQBP1O60828 265 aaKnown RBP16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 FDX1P10109 184 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 RAG1P15918 1043 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 EPHB4P54760 987 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 FAAP100Q0VG06 881 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 CHST13Q8NET6 341 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 CEP95Q96GE4 821 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 FGD4Q96M96 766 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 UPF3AQ9H1J1 476 aaKnown RBP16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 ABHD16BQ9H3Z7 469 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 STARD7Q9NQZ5 370 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 CLIP2Q9UDT6 1046 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 LCTP09848 1927 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 ELP1O95163 1332 aa16.13■□□□□ 0.17
SPTAN1-209ENST00000497216 DCDC2CA8MYV0 355 aa16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 TTLL1O95922 423 aa16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 TDO2P48775 406 aa16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 FPGSQ05932 587 aa16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 ACVR2BQ13705 512 aa16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 LRRFIP1Q32MZ4 808 aaKnown RBP16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 ZNF444Q8N0Y2 327 aaPredicted RBP16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 RNPC3Q96LT9 517 aaKnown RBP16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 TMEM39AQ9NV64 488 aa16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 ZHX1Q9UKY1 873 aaPredicted RBP16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 TBX21Q9UL17 535 aa16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 MROH7Q68CQ1 1323 aa16.12■□□□□ 0.17
SPTAN1-209ENST00000497216 PATL2C9JE40 543 aaKnown RBP16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 M0R2C6 588 aa16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 NKX3-2P78367 333 aa16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 KCNA10Q16322 511 aa16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 IFNL3Q8IZI9 196 aa16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 CPXCR1Q8N123 301 aa16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 STK11IPQ8N1F8 1099 aa16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 PCSK9Q8NBP7 692 aaKnown RBP16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 NEDD1Q8NHV4 660 aa16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 MAFAQ8NHW3 353 aaPredicted RBP16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 RAVER2Q9HCJ3 691 aaKnown RBP16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 CTDP1Q9Y5B0 961 aaPredicted RBP16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 TTC41PQ6P2S7 1318 aa16.11■□□□□ 0.17
SPTAN1-209ENST00000497216 MYADML2A6NDP7 307 aa16.1■□□□□ 0.17
SPTAN1-209ENST00000497216 ADCY6O43306 1168 aa16.1■□□□□ 0.17
SPTAN1-209ENST00000497216 PRDM1O75626 825 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms