RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 HAUS7Q99871 368 aa9.23□□□□□ -0.93
SF3B1-212ENST00000496458 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.23□□□□□ -0.939e-7■■□□□ 12
SF3B1-212ENST00000496458 C19orf44Q9H6X5 657 aa9.23□□□□□ -0.93
SF3B1-212ENST00000496458 ZNF281Q9Y2X9 895 aa9.23□□□□□ -0.93
SF3B1-212ENST00000496458 FITM1A5D6W6 292 aa9.22□□□□□ -0.93
SF3B1-212ENST00000496458 ZNF503-AS2A6NEH8 195 aa9.22□□□□□ -0.93
SF3B1-212ENST00000496458 ITGA4P13612 1032 aa9.22□□□□□ -0.93
SF3B1-212ENST00000496458 BMP8BP34820 402 aa9.22□□□□□ -0.93
SF3B1-212ENST00000496458 OGFOD2Q6N063 350 aa9.22□□□□□ -0.93
SF3B1-212ENST00000496458 LIN37Q96GY3 246 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-212ENST00000496458 G6PC3Q9BUM1 346 aa9.22□□□□□ -0.93
SF3B1-212ENST00000496458 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.21□□□□□ -0.94
SF3B1-212ENST00000496458 H0Y8X5 98 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 USP2O75604 605 aaPredicted RBP9.21□□□□□ -0.94
SF3B1-212ENST00000496458 GSNP06396 782 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 DNAJA1P31689 397 aaKnown RBP9.21□□□□□ -0.94
SF3B1-212ENST00000496458 TXKP42681 527 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 ARID5AQ03989 594 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 TCEAL1Q15170 157 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 TIGD5Q53EQ6 642 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 ANKS4BQ8N8V4 417 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 LINC01599Q8WXQ3 324 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 KLHL6Q8WZ60 621 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 SP110Q9HB58 689 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.21□□□□□ -0.94
SF3B1-212ENST00000496458 FHOD1Q9Y613 1164 aa9.21□□□□□ -0.94
SF3B1-212ENST00000496458 SMAD7O15105 426 aaKnown RBP9.2□□□□□ -0.94
SF3B1-212ENST00000496458 ZNF205O95201 554 aa9.2□□□□□ -0.94
SF3B1-212ENST00000496458 FGRP09769 529 aa9.2□□□□□ -0.94
SF3B1-212ENST00000496458 CHRNEQ04844 493 aa9.2□□□□□ -0.94
SF3B1-212ENST00000496458 CWF19L1Q69YN2 538 aaKnown RBP9.2□□□□□ -0.94
SF3B1-212ENST00000496458 HEATR6Q6AI08 1181 aaKnown RBP9.2□□□□□ -0.94
SF3B1-212ENST00000496458 VHLLQ6RSH7 139 aa9.2□□□□□ -0.94
SF3B1-212ENST00000496458 MPZL3Q6UWV2 235 aa9.2□□□□□ -0.94
SF3B1-212ENST00000496458 SPPL2CQ8IUH8 684 aa9.2□□□□□ -0.94
SF3B1-212ENST00000496458 FIBCD1Q8N539 461 aa9.2□□□□□ -0.94
SF3B1-212ENST00000496458 MAP6Q96JE9 813 aa9.2□□□□□ -0.94
SF3B1-212ENST00000496458 CDADC1Q9BWV3 514 aa9.2□□□□□ -0.94
SF3B1-212ENST00000496458 RNF32Q9H0A6 362 aa9.2□□□□□ -0.94
SF3B1-212ENST00000496458 NOL6Q9H6R4 1146 aaKnown RBP9.2□□□□□ -0.94
SF3B1-212ENST00000496458 LRRC10BA6NIK2 292 aa9.19□□□□□ -0.94
SF3B1-212ENST00000496458 EPHX1P07099 455 aa9.19□□□□□ -0.94
SF3B1-212ENST00000496458 VAV1P15498 845 aa9.19□□□□□ -0.94
SF3B1-212ENST00000496458 KIAA1211LQ6NV74 962 aa9.19□□□□□ -0.94
SF3B1-212ENST00000496458 LILRA2Q8N149 483 aa9.19□□□□□ -0.94
SF3B1-212ENST00000496458 ADCY4Q8NFM4 1077 aa9.19□□□□□ -0.94
SF3B1-212ENST00000496458 KLHL25Q9H0H3 589 aa9.19□□□□□ -0.94
SF3B1-212ENST00000496458 WHRNQ9P202 907 aa9.19□□□□□ -0.94
SF3B1-212ENST00000496458 NR0B2Q15466 257 aa9.18□□□□□ -0.94
SF3B1-212ENST00000496458 MLANAQ16655 118 aa9.18□□□□□ -0.94
SF3B1-212ENST00000496458 MCF2L2Q86YR7 1114 aa9.18□□□□□ -0.94
SF3B1-212ENST00000496458 HHIPL1Q96JK4 782 aa9.18□□□□□ -0.94
SF3B1-212ENST00000496458 FCRL2Q96LA5 508 aaPredicted RBP9.18□□□□□ -0.94
SF3B1-212ENST00000496458 FGD4Q96M96 766 aa9.18□□□□□ -0.94
SF3B1-212ENST00000496458 ZDHHC15Q96MV8 337 aa9.18□□□□□ -0.94
SF3B1-212ENST00000496458 GBP3Q9H0R5 595 aa9.18□□□□□ -0.94
SF3B1-212ENST00000496458 AP5S1Q9NUS5 200 aa9.18□□□□□ -0.94
SF3B1-212ENST00000496458 GPR160Q9UJ42 338 aa9.18□□□□□ -0.94
SF3B1-212ENST00000496458 ENDOUP21128 410 aaKnown RBP9.17□□□□□ -0.94
SF3B1-212ENST00000496458 ETFBP38117 255 aa9.17□□□□□ -0.94
SF3B1-212ENST00000496458 PPP2R5DQ14738 602 aa9.17□□□□□ -0.94
SF3B1-212ENST00000496458 CEP128Q6ZU80 1094 aa9.17□□□□□ -0.94
SF3B1-212ENST00000496458 ADAT2Q7Z6V5 191 aaKnown RBP9.17□□□□□ -0.94
SF3B1-212ENST00000496458 FAM53CQ9NYF3 392 aa9.17□□□□□ -0.94
SF3B1-212ENST00000496458 ACTR10Q9NZ32 417 aa9.17□□□□□ -0.94
SF3B1-212ENST00000496458 SF3B6Q9Y3B4 125 aaKnown RBP9.17□□□□□ -0.94
SF3B1-212ENST00000496458 PSPNO60542 156 aa9.16□□□□□ -0.94
SF3B1-212ENST00000496458 GSTM1P09488 218 aa9.16□□□□□ -0.94
SF3B1-212ENST00000496458 KIR2DL1P43626 348 aaPredicted RBP9.16□□□□□ -0.94
SF3B1-212ENST00000496458 KIR2DL2P43627 348 aaPredicted RBP9.16□□□□□ -0.94
SF3B1-212ENST00000496458 SLC14A2Q15849 920 aa9.16□□□□□ -0.94
SF3B1-212ENST00000496458 TNNI3KQ59H18 835 aa9.16□□□□□ -0.94
SF3B1-212ENST00000496458 RTP2Q5QGT7 225 aa9.16□□□□□ -0.94
SF3B1-212ENST00000496458 LARP1BQ659C4 914 aaKnown RBP9.16□□□□□ -0.94
SF3B1-212ENST00000496458 SLC12A9Q9BXP2 914 aa9.16□□□□□ -0.94
SF3B1-212ENST00000496458 ZNF408Q9H9D4 720 aa9.16□□□□□ -0.94
SF3B1-212ENST00000496458 ERVK13-1Q9NX77 482 aa9.16□□□□□ -0.94
SF3B1-212ENST00000496458 PRKAG3Q9UGI9 489 aa9.16□□□□□ -0.94
SF3B1-212ENST00000496458 GPR55Q9Y2T6 319 aaPredicted RBP9.16□□□□□ -0.94
SF3B1-212ENST00000496458 A0A087WZG4 1122 aa9.15□□□□□ -0.94
SF3B1-212ENST00000496458 PPM1BO75688 479 aa9.15□□□□□ -0.94
SF3B1-212ENST00000496458 GALK1P51570 392 aa9.15□□□□□ -0.94
SF3B1-212ENST00000496458 PRR23BQ6ZRT6 265 aa9.15□□□□□ -0.94
SF3B1-212ENST00000496458 SLC43A3Q8NBI5 491 aa9.15□□□□□ -0.94
SF3B1-212ENST00000496458 DIRC2Q96SL1 478 aa9.15□□□□□ -0.94
SF3B1-212ENST00000496458 NOTOA8MTQ0 251 aa9.14□□□□□ -0.95
SF3B1-212ENST00000496458 CD3EP07766 207 aa9.14□□□□□ -0.95
SF3B1-212ENST00000496458 POU5F2Q8N7G0 328 aa9.14□□□□□ -0.95
SF3B1-212ENST00000496458 NAT16Q8N8M0 369 aa9.14□□□□□ -0.95
SF3B1-212ENST00000496458 TNFRSF10DQ9UBN6 386 aa9.14□□□□□ -0.95
SF3B1-212ENST00000496458 SUSD2Q9UGT4 822 aa9.14□□□□□ -0.95
SF3B1-212ENST00000496458 DIS3Q9Y2L1 958 aaKnown RBP9.14□□□□□ -0.95
SF3B1-212ENST00000496458 SUGT1Q9Y2Z0 365 aa9.14□□□□□ -0.95
SF3B1-212ENST00000496458 ANKRD34BA5PLL1 514 aa9.13□□□□□ -0.95
SF3B1-212ENST00000496458 FADS2P1A8MWK0 482 aa9.13□□□□□ -0.95
SF3B1-212ENST00000496458 NRDCO43847 1150 aa9.13□□□□□ -0.95
SF3B1-212ENST00000496458 EFEMP2O95967 443 aa9.13□□□□□ -0.95
SF3B1-212ENST00000496458 RTP1P59025 263 aa9.13□□□□□ -0.95
SF3B1-212ENST00000496458 ZC3H6P61129 1189 aaKnown RBP9.13□□□□□ -0.95
SF3B1-212ENST00000496458 POU4F1Q01851 419 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms