RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 AKR1B15C9JRZ8 316 aaPredicted RBP13.04□□□□□ -0.32
CDCA7-208ENST00000496441 BMP15O95972 392 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 CALML3P27482 149 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 GSTO1P78417 241 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 TRIM65Q6PJ69 517 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 PIGSQ96S52 555 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 TMEM260Q9NX78 707 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 USP17L5A8MUK1 530 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 ZSCAN12O43309 604 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 GYS1P13807 737 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 ERCC5P28715 1186 aaPredicted RBP13.04□□□□□ -0.32
CDCA7-208ENST00000496441 PRCPP42785 496 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 E2F4Q16254 413 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 PDXDC2PQ6P474 469 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 SH3RF1Q7Z6J0 888 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 HPS3Q969F9 1004 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 ERO1AQ96HE7 468 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
CDCA7-208ENST00000496441 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
CDCA7-208ENST00000496441 GPCPD1Q9NPB8 672 aa13.04□□□□□ -0.32
CDCA7-208ENST00000496441 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■□□□□ 10.9
CDCA7-208ENST00000496441 SMCO2A6NFE2 343 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 KIF2AO00139 706 aaPredicted RBP13.03□□□□□ -0.32
CDCA7-208ENST00000496441 RPN1P04843 607 aaKnown RBP13.03□□□□□ -0.32
CDCA7-208ENST00000496441 LDHCP07864 332 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 TECP42680 631 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 FXR1P51114 621 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDCA7-208ENST00000496441 ST5P78524 1137 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 COA7Q96BR5 231 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 MRPL44Q9H9J2 332 aaKnown RBP13.03□□□□□ -0.32
CDCA7-208ENST00000496441 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
CDCA7-208ENST00000496441 MYH8P13535 1937 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 LTBP4Q8N2S1 1624 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 A0A1B0GTH6 734 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 PARP1P09874 1014 aaKnown RBP13.03□□□□□ -0.32
CDCA7-208ENST00000496441 TBX2Q13207 712 aaPredicted RBP13.03□□□□□ -0.32
CDCA7-208ENST00000496441 GRM4Q14833 912 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 KRT31Q15323 416 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 FILIP1LQ4L180 1135 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 GJA10Q969M2 543 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 FLT1P17948 1338 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
CDCA7-208ENST00000496441 RNF225M0QZC1 329 aaPredicted RBP13.02□□□□□ -0.32
CDCA7-208ENST00000496441 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.32
CDCA7-208ENST00000496441 ABL1P00519 1130 aa13.02□□□□□ -0.32
CDCA7-208ENST00000496441 TFRCP02786 760 aaKnown RBP13.02□□□□□ -0.32
CDCA7-208ENST00000496441 CASQ1P31415 396 aa13.02□□□□□ -0.32
CDCA7-208ENST00000496441 PMS1P54277 932 aaKnown RBP13.02□□□□□ -0.32
CDCA7-208ENST00000496441 PAK1Q13153 545 aa13.02□□□□□ -0.32
CDCA7-208ENST00000496441 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.32
CDCA7-208ENST00000496441 CCDC12Q8WUD4 166 aaPredicted RBP13.02□□□□□ -0.32
CDCA7-208ENST00000496441 ADD3Q9UEY8 706 aaKnown RBP13.02□□□□□ -0.32
CDCA7-208ENST00000496441 FAM196BA6NMK8 535 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 STXBP3O00186 592 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 TXKP42681 527 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 CACNB3P54284 484 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 CCDC178Q5BJE1 867 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 RAD9BQ6WBX8 426 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 APTXQ7Z2E3 356 aaKnown RBP13.02□□□□□ -0.33
CDCA7-208ENST00000496441 SEC63Q9UGP8 760 aaKnown RBP13.02□□□□□ -0.33
CDCA7-208ENST00000496441 G3V3G9 751 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 STX10O60499 249 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 C4orf32Q8N8J7 132 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 ACRBPQ8NEB7 543 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 TBC1D16Q8TBP0 767 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 LRRC15Q8TF66 581 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 UBXN4Q92575 508 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 BARHL2Q9NY43 387 aa13.02□□□□□ -0.33
CDCA7-208ENST00000496441 SLC16A2P36021 539 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 UBXN1Q04323 297 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 TXNRD1Q16881 649 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 ST7Q9NRC1 585 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 ZHX1Q9UKY1 873 aaPredicted RBP13.01□□□□□ -0.33
CDCA7-208ENST00000496441 AFF2P51816 1311 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 KCNJ18B7U540 433 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 GTPBP6O43824 516 aaPredicted RBP13.01□□□□□ -0.33
CDCA7-208ENST00000496441 GYPCP04921 128 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 KCNJ12Q14500 433 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 NAALADL2Q58DX5 795 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 TEX35Q5T0J7 233 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 ELOA2Q8IYF1 753 aaPredicted RBP13.01□□□□□ -0.33
CDCA7-208ENST00000496441 RBM17Q96I25 401 aaKnown RBP13.01□□□□□ -0.33
CDCA7-208ENST00000496441 TFR2Q9UP52 801 aa13.01□□□□□ -0.33
CDCA7-208ENST00000496441 CCP110O43303 1012 aa13□□□□□ -0.33
CDCA7-208ENST00000496441 TRAPPC10P48553 1259 aa13□□□□□ -0.33
CDCA7-208ENST00000496441 DDR1Q08345 913 aa13□□□□□ -0.33
CDCA7-208ENST00000496441 TCP10Q12799 353 aa13□□□□□ -0.33
CDCA7-208ENST00000496441 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
CDCA7-208ENST00000496441 CCDC148Q8NFR7 591 aa13□□□□□ -0.33
CDCA7-208ENST00000496441 TBCKQ8TEA7 893 aa13□□□□□ -0.33
CDCA7-208ENST00000496441 RRP36Q96EU6 259 aaKnown RBP13□□□□□ -0.33
CDCA7-208ENST00000496441 TRIM47Q96LD4 638 aa13□□□□□ -0.33
CDCA7-208ENST00000496441 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
CDCA7-208ENST00000496441 PDS5AQ29RF7 1337 aaKnown RBP13□□□□□ -0.33
CDCA7-208ENST00000496441 PALM3A6NDB9 673 aaPredicted RBP13□□□□□ -0.33
CDCA7-208ENST00000496441 PLCG1P19174 1290 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms