RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 IKQ13123 557 aaPredicted RBP25.29■■□□□ 1.64
ECHDC3-205ENST00000496136 CATSPERGQ6ZRH7 1159 aa25.29■■□□□ 1.64
ECHDC3-205ENST00000496136 DAXXQ9UER7 740 aaPredicted RBP25.29■■□□□ 1.64
ECHDC3-205ENST00000496136 V9GY48 417 aaPredicted RBP25.29■■□□□ 1.64
ECHDC3-205ENST00000496136 USP17L15C9J2P7 530 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 USP17L13C9JLJ4 530 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 USP17L11C9JVI0 530 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 USP17L18D6R9N7 530 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 USP17L22D6RA61 530 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 USP17L17D6RBQ6 530 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 USP17L19D6RCP7 530 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 USP17L20D6RJB6 530 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 FDPSP14324 419 aaKnown RBP25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 SSRP1Q08945 709 aaKnown RBP25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 USP17L24Q0WX57 530 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 DEFB115Q30KQ5 88 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 FAM160B2Q86V87 743 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 DDX11Q96FC9 970 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 SLC26A6Q9BXS9 759 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 AGTPBP1Q9UPW5 1226 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 CNTNAP5Q8WYK1 1306 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 CCL15-CCL14A0A0B4J2E2 113 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 RASSF10A6NK89 507 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 FMNL1O95466 1100 aaPredicted RBP25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 HOXA7P31268 230 aaPredicted RBP25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 CCL15Q16663 113 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 GPAT2Q6NUI2 795 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 PRPF38AQ8NAV1 312 aaKnown RBP25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 BRI3BPQ8WY22 251 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 RNF26Q9BY78 433 aaPredicted RBP25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 JMJD4Q9H9V9 463 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 PRR12Q9ULL5 1215 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 SMC3Q9UQE7 1217 aa25.28■■□□□ 1.64
ECHDC3-205ENST00000496136 hCG_1642624A0A1W2PR95 340 aa25.27■■□□□ 1.64
ECHDC3-205ENST00000496136 PRPF3O43395 683 aaKnown RBP25.27■■□□□ 1.64
ECHDC3-205ENST00000496136 FLOT1O75955 427 aa25.27■■□□□ 1.64
ECHDC3-205ENST00000496136 SYDE2Q5VT97 1194 aa25.27■■□□□ 1.64
ECHDC3-205ENST00000496136 TRIM22Q8IYM9 498 aa25.27■■□□□ 1.64
ECHDC3-205ENST00000496136 COG2Q14746 738 aa25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 CYP4F22Q6NT55 531 aa25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 PIBF1Q8WXW3 757 aa25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 KIFC2Q96AC6 838 aa25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 SLF1Q9BQI6 1058 aa25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 ORC3Q9UBD5 711 aaPredicted RBP25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 TESPA1A2RU30 521 aaPredicted RBP25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 GJB2P29033 226 aa25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 HMGN5P82970 282 aaKnown RBP25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 PAXIP1Q6ZW49 1069 aaPredicted RBP25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 MTMR8Q96EF0 704 aa25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 PIGSQ96S52 555 aa25.26■■□□□ 1.63
ECHDC3-205ENST00000496136 MYH6P13533 1939 aa25.25■■□□□ 1.63
ECHDC3-205ENST00000496136 RLFQ13129 1914 aa25.25■■□□□ 1.63
ECHDC3-205ENST00000496136 MANSC4A6NHS7 340 aaPredicted RBP25.25■■□□□ 1.63
ECHDC3-205ENST00000496136 SAMD1Q6SPF0 538 aaPredicted RBP25.25■■□□□ 1.63
ECHDC3-205ENST00000496136 PTPN18Q99952 460 aa25.25■■□□□ 1.63
ECHDC3-205ENST00000496136 PPP1R9AQ9ULJ8 1098 aa25.25■■□□□ 1.63
ECHDC3-205ENST00000496136 STK36Q9NRP7 1315 aa25.24■■□□□ 1.63
ECHDC3-205ENST00000496136 PARP14Q460N5 1801 aa25.24■■□□□ 1.63
ECHDC3-205ENST00000496136 AKAP17AQ02040 695 aaKnown RBP25.24■■□□□ 1.63
ECHDC3-205ENST00000496136 PKN1Q16512 942 aa25.24■■□□□ 1.63
ECHDC3-205ENST00000496136 RRP36Q96EU6 259 aaKnown RBP25.24■■□□□ 1.63
ECHDC3-205ENST00000496136 HOXC10Q9NYD6 342 aa25.24■■□□□ 1.63
ECHDC3-205ENST00000496136 BTBD19C9JJ37 291 aa25.23■■□□□ 1.63
ECHDC3-205ENST00000496136 DSG3P32926 999 aa25.23■■□□□ 1.63
ECHDC3-205ENST00000496136 GRM1Q13255 1194 aa25.23■■□□□ 1.63
ECHDC3-205ENST00000496136 HOMER1Q86YM7 354 aa25.23■■□□□ 1.63
ECHDC3-205ENST00000496136 DEXIO95424 95 aa25.23■■□□□ 1.63
ECHDC3-205ENST00000496136 SNAP25P60880 206 aa25.23■■□□□ 1.63
ECHDC3-205ENST00000496136 PABPC4Q13310 644 aaKnown RBP eCLIP25.23■■□□□ 1.63
ECHDC3-205ENST00000496136 ASCC2Q9H1I8 757 aaPredicted RBP25.23■■□□□ 1.63
ECHDC3-205ENST00000496136 RBM27Q9P2N5 1060 aaKnown RBP25.23■■□□□ 1.63
ECHDC3-205ENST00000496136 ADAMTS5Q9UNA0 930 aa25.23■■□□□ 1.63
ECHDC3-205ENST00000496136 ZBTB5O15062 677 aa25.22■■□□□ 1.63
ECHDC3-205ENST00000496136 INHBEP58166 350 aa25.22■■□□□ 1.63
ECHDC3-205ENST00000496136 HTRA3P83110 453 aa25.22■■□□□ 1.63
ECHDC3-205ENST00000496136 ANKRD23Q86SG2 305 aa25.22■■□□□ 1.63
ECHDC3-205ENST00000496136 ZIC5Q96T25 663 aa25.22■■□□□ 1.63
ECHDC3-205ENST00000496136 P2RX7Q99572 595 aaKnown RBP25.22■■□□□ 1.63
ECHDC3-205ENST00000496136 PNMA6FA0A0J9YX94 578 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 FAM43AQ8N2R8 423 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 FAM184AQ8NB25 1140 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 ATG4CQ96DT6 458 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 CAPNS2Q96L46 248 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 AIFM3Q96NN9 605 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 SEC63Q9UGP8 760 aaKnown RBP25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 SLC45A1Q9Y2W3 748 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 MYPNQ86TC9 1320 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 PDHXO00330 501 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 VWA5AO00534 786 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 IRX3P78415 501 aaPredicted RBP25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 CDC37Q16543 378 aaPredicted RBP25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 PFKFB3Q16875 520 aaPredicted RBP25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 QRICH1Q2TAL8 776 aa25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 RANBP17Q9H2T7 1088 aaKnown RBP25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 CWC22Q9HCG8 908 aaKnown RBP25.21■■□□□ 1.63
ECHDC3-205ENST00000496136 SPDYE16A6NNV3 312 aaPredicted RBP25.2■■□□□ 1.62
ECHDC3-205ENST00000496136 SCG2P13521 617 aa25.2■■□□□ 1.62
ECHDC3-205ENST00000496136 OSBPP22059 807 aa25.2■■□□□ 1.62
ECHDC3-205ENST00000496136 NOGQ13253 232 aa25.2■■□□□ 1.62
ECHDC3-205ENST00000496136 SLC38A10Q9HBR0 1119 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms